RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 DDX39BQ13838 428 aaKnown RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 DMC1Q14565 340 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 SHROOM1Q2M3G4 852 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 TIGD5Q53EQ6 642 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 N4BP2L1Q5TBK1 243 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 BBS12Q6ZW61 710 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 PAGE2Q7Z2X7 111 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 CLYBLQ8N0X4 340 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 CYP4Z2PQ8N1L4 340 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 CLEC4FQ8N1N0 589 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 KREMEN2Q8NCW0 462 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 POP5Q969H6 163 aaKnown RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 RERGQ96A58 199 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 PHPT1Q9NRX4 125 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 MARCOQ9UEW3 520 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 ZNHIT2Q9UHR6 403 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ENOPH1Q9UHY7 261 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 TFR2Q9UP52 801 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 DNAJC16Q9Y2G8 782 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 STXBP5LQ9Y2K9 1186 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 DUSP10Q9Y6W6 482 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 RASSF10A6NK89 507 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 E9PAM4 449 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 BTN3A1O00481 513 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 IRAK2O43187 625 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 VAPBO95292 243 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 MAP3K6O95382 1288 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 MLYCDO95822 493 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 GTF2E2P29084 291 aaKnown RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 GATA4P43694 442 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 CAP1Q01518 475 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 CSTF3Q12996 717 aaKnown RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 RFTN1Q14699 578 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 KHDRBS2Q5VWX1 349 aaKnown RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 CDK20Q8IZL9 346 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 RBFAQ8N0V3 343 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 C10orf53Q8N6V4 93 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 NOA1Q8NC60 698 aaKnown RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 SLC22A17Q8WUG5 538 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 OVCA2Q8WZ82 227 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 JADE3Q92613 823 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 EMID1Q96A84 441 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 NR1H4Q96RI1 486 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 PNKPQ96T60 521 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 SLC9A7Q96T83 725 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 GMLQ99445 158 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 NTPCRQ9BSD7 190 aaKnown RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 THUMPD3Q9BV44 507 aaKnown RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 MAGEH1Q9H213 219 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ATAD3AQ9NVI7 634 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 THAP1Q9NVV9 213 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 NDOR1Q9UHB4 597 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 PCDHB1Q9Y5F3 818 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 HEBP2Q9Y5Z4 205 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 CACNA1FO60840 1977 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 PLCH1Q4KWH8 1693 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 SNED1Q8TER0 1413 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 CCT8L1PA6NM43 557 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 MAFKO60675 156 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 TRIM13O60858 407 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 F11P03951 625 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ELFN1P0C7U0 828 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 RPL21P46778 160 aaKnown RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 MNX1P50219 401 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 PURAQ00577 322 aaKnown RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 PFKPQ01813 784 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 SPIDRQ14159 915 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 CCL14Q16627 93 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ZNF618Q5T7W0 954 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 NEPROQ6NW34 567 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ANKS1BQ7Z6G8 1248 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 TMEM132CQ8N3T6 1108 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 B4GALNT2Q8NHY0 566 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ACMSDQ8TDX5 336 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 KCTD13Q8WZ19 329 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ANKRD7Q92527 254 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 FCRL2Q96LA5 508 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 BBS4Q96RK4 519 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 SOHLH2Q9NX45 425 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 TMEM216Q9P0N5 145 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 FNIP2Q9P278 1114 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 A0A096LPK6 155 aa4.27□□□□□ -1.73
CFTR-201ENST00000003084 TCAF2A6NFQ2 919 aa4.27□□□□□ -1.73
CFTR-201ENST00000003084 B2RBV5 119 aa4.27□□□□□ -1.73
CFTR-201ENST00000003084 NT5C1B-RDH14C9J2C7 533 aa4.27□□□□□ -1.73
CFTR-201ENST00000003084 PRAMEF4O60810 478 aa4.27□□□□□ -1.73
CFTR-201ENST00000003084 PECAM1P16284 738 aaPredicted RBP4.27□□□□□ -1.73
CFTR-201ENST00000003084 SSTR4P31391 388 aa4.27□□□□□ -1.73
CFTR-201ENST00000003084 RANBP1P43487 201 aa4.27□□□□□ -1.73
CFTR-201ENST00000003084 GLRBP48167 497 aa4.27□□□□□ -1.73
CFTR-201ENST00000003084 PTP4A2Q12974 167 aa4.27□□□□□ -1.73
CFTR-201ENST00000003084 ZNHIT3Q15649 155 aaPredicted RBP4.27□□□□□ -1.73
CFTR-201ENST00000003084 ALG11Q2TAA5 492 aa4.27□□□□□ -1.73
CFTR-201ENST00000003084 INAVAQ3KP66 663 aa4.27□□□□□ -1.73
CFTR-201ENST00000003084 CDCA2Q69YH5 1023 aaPredicted RBP4.27□□□□□ -1.73
CFTR-201ENST00000003084 CHPFQ8IZ52 775 aa4.27□□□□□ -1.73
CFTR-201ENST00000003084 NPLOC4Q8TAT6 608 aa4.27□□□□□ -1.73
CFTR-201ENST00000003084 OTULINQ96BN8 352 aa4.27□□□□□ -1.73
CFTR-201ENST00000003084 SUSD3Q96L08 255 aa4.27□□□□□ -1.73
CFTR-201ENST00000003084 SEMA3CQ99985 751 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms