RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Gpr3P35413 330 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Samd11Q1RNF8 542 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Kctd8Q50H33 476 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Prss53Q571E5 552 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Grb10Q60760 621 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Tead4Q62296 427 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Abhd10Q6PE15 297 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Olfr1062Q7TR71 315 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Washc5Q8C2E7 1159 aaKnown RBP16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Rmnd1Q8CI78 450 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Ecrg4Q99LS0 148 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Rabgef1Q9JM13 491 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 CasrQ9QY96 1079 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Grm3Q9QYS2 879 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 PigqQ9QYT7 581 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Osbpl8B9EJ86 889 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Taf4E9QAP7 1042 aaKnown RBP16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Calb2Q08331 271 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Cyp2c65Q148B1 490 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Colec11Q3SXB8 272 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Entpd7Q3TCT4 606 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Galnt10Q6P9S7 603 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Tmem259Q8CIV2 574 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Zdhhc12Q8VC90 267 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Olfr589Q8VGV8 317 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Dhrs7bQ99J47 323 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 CabyrQ9D424 453 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 4930524N10RikQ9D519 233 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 C130060K24RikG3UWA8 416 aa16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 Vmn2r111K7N674 857 aa16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 Slc1a6O35544 561 aa16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 Gna12P27600 379 aa16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 Csrp3P50462 194 aa16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 Smpdl3bP58242 456 aa16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 Hbq1bQ3U0A6 142 aa16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 Mettl17Q3U2U7 461 aa16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 Gm8773Q3UQ24 132 aa16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 Dyrk2Q5U4C9 599 aa16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 Cntn4Q69Z26 1026 aa16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 Scd4Q6T707 353 aa16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 Ago1Q8CJG1 857 aaKnown RBP16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 Mark1Q8VHJ5 795 aa16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 AjubaQ91XC0 547 aa16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 Txndc12Q9CQU0 170 aa16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 Ten1Q9D7K2 161 aa16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 Tdp2Q9JJX7 370 aa16.02■□□□□ 0.15
Trim39-203ENSMUST00000113706 Gm21964A0A1W2P7S4 437 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Cd160O88875 185 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Sp1O89090 784 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 P01810 119 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 UtyP79457 1212 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Ncf4P97369 339 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Col19a1Q0VF58 1136 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Arid5aQ3U108 590 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Trafd1Q3UDK1 580 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Lrrc47Q505F5 581 aaKnown RBP16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Rimbp2Q80U40 1072 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Olfr665Q8VG79 316 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Scnn1bQ9WU38 638 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Nup205A0A0J9YUD5 2061 aaKnown RBP16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Ap3d1O54774 1199 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 P01668 110 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Matn1P51942 500 aaKnown RBP16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Agap2Q3UHD9 1186 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Srbd1Q497V5 1015 aaKnown RBP16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 TdrkhQ80VL1 560 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Fut11Q8BHC9 489 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Tubgcp5Q8BKN5 1024 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Tmco6Q8BQX5 494 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Wnt9aQ8R5M2 365 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Ndufb5Q9CQH3 189 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 Tmem80Q9D3H0 123 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 RhojQ9ER71 214 aa16.01■□□□□ 0.15
Trim39-203ENSMUST00000113706 LdhcP00342 332 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Spp1P10923 294 aaKnown RBP16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Olfr213Q7TS32 327 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Fbxw8Q8BIA4 598 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Gm6370A0A0G2JGX9 315 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Pramef17A2ASJ1 475 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Mkrn2osD3Z393 217 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Cilp2D3Z7H8 1162 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Cyp2j12G3UXT0 502 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Gm6408J3QNG1 320 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Gm3402K7N5P2 326 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Gm6309L7N481 315 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Klf6O08584 283 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Bmpr1aP36895 532 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Ssx9Q6XAS3 170 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Pnma8aQ80VM8 430 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Tecpr1Q80VP0 1166 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Shc2Q8BMC3 573 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Clptm1lQ8BXA5 539 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Brd8Q8R3B7 951 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 PolhQ9JJN0 694 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Spag6Q9JLI7 507 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Rp1l1Q8CGM2 1859 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Cntnap3E9PY62 1287 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Olfr603L7N1Y4 312 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Wnt6P22727 364 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Sult1e1P49891 295 aa16■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 46.2 ms