RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Rab10P61027 200 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Insm1Q63ZV0 521 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Rfx4Q7TNK1 735 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Q810S2 196 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Anapc2Q8BZQ7 837 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Bhlhe22Q8C6A8 355 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Map3k21Q8VDG6 1002 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Tas1r1Q99PG6 842 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Bbs2Q9CWF6 721 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Tmem81Q9D5K1 259 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Scnn1bQ9WU38 638 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 NesQ6P5H2 1864 aaKnown RBP15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Zbed5B2RPU8 756 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Vmn2r59E9PUT5 865 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Fgf10O35565 209 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 HmgcrQ01237 887 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 PhgdhQ61753 533 aaKnown RBP15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Ifi44Q8BV66 422 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 KyQ8C8H8 661 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Actr8Q8R2S9 624 aaKnown RBP15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Setd7Q8VHL1 366 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Anks3Q9CZK6 655 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Gys1Q9Z1E4 738 aaKnown RBP15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Umodl1Q5DID3 1319 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Trim15G3UY57 292 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Gdf6P43028 454 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Tnfaip8l3Q3TBL6 204 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Brms1lQ3U1T3 323 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Slc22a16Q497L8 649 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Cln3Q61124 438 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Fnip1Q68FD7 1165 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Teddm1aQ810U2 305 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Wasf2Q8BH43 497 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Rab36Q8CAM5 267 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Tpgs1Q99MS8 303 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Fam32aQ9CR80 112 aaKnown RBP15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Ssu72Q9CY97 194 aaKnown RBP15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Fam227aQ9D3V8 625 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Olfr703Q9EPF5 319 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Vps35Q9EQH3 796 aaKnown RBP15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Med20Q9R0X0 212 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Gm4869A0A1B0GSG7 984 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Gjb3P28231 270 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Prim2P33610 505 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 PuraP42669 321 aaKnown RBP15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Rnf145Q5SWK7 663 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 H2afy2Q8CCK0 372 aaKnown RBP15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 DolkQ8R2Y3 534 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Mob2Q8VI63 235 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Atad1Q9D5T0 361 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Efhc1Q9D9T8 648 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 DgkeQ9R1C6 564 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Racgap1Q9WVM1 628 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Ifi213D3Z5G0 586 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Rgsl1H3BL40 1073 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Hspa1bP17879 642 aaKnown RBP15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 FpgsP48760 587 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 PgfP49764 158 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ythdf1P59326 559 aaKnown RBP15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Fam20cQ5MJS3 579 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Scaf4Q6PFF0 1209 aaKnown RBP15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gpr141Q7TQP0 305 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Thoc5Q8BKT7 683 aaKnown RBP15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Lrrc19Q8BZT5 364 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Sfrp1Q8C4U3 314 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Kctd12bQ8C7J6 292 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Zbtb8bQ8CII0 484 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Defb19Q8K3I8 83 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Fam151aQ8QZW3 608 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Efcab9Q9DAM2 216 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 PgdQ9DCD0 483 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 IgtpQ9DCE9 423 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Capn10Q9ESK3 666 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Cab39Q06138 341 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Pecam1Q08481 727 aaKnown RBP15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Six1Q62231 284 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Defb34Q7TNV8 81 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 DseQ8BLI4 958 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Rap2cQ8BU31 183 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Rem2Q8VEL9 341 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 March2Q99M02 246 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Tma16Q9CR02 221 aaKnown RBP15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Arap2Q8BZ05 1703 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Zc3h12bG3X9I7 835 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Olfr1022L7MTT3 315 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Sox6P40645 827 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 GckP52792 465 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Fdft1P53798 416 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 PrkcqQ02111 707 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Dnal1Q05A62 190 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Pdlim7Q3TJD7 457 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ppp1r14bQ62084 147 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Fam149b1Q6NSV7 578 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Dusp11Q6NXK5 321 aaKnown RBP15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Samd4bQ80XS6 687 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Erich5Q8K0S2 362 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 AslQ91YI0 464 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Npm3Q9CPP0 175 aaKnown RBP15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Mical3Q8CJ19 1993 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Fpr-rs4A4FUQ5 323 aa15.64■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms