RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Rc3h2P0C090 1187 aaKnown RBP21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Ranbp9P69566 653 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Tmc5Q32NZ6 967 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Fam81aQ3UXZ6 364 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Nxpe4Q52KP5 543 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Kctd16Q5DTY9 427 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 G2e3Q5RJY2 716 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Rnf215Q5SPX3 379 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Olfr464Q5SW48 313 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Gdpd5Q640M6 607 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 IfnzQ8BQT1 182 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Gm13278Q8CD73 182 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Ssu72Q9CY97 194 aaKnown RBP21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 4930578G10RikQ9D4Q4 153 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Agpat3Q9D517 376 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Aldh18a1Q9Z110 795 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Speer4f2E9Q366 295 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Mllt10O54826 1068 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Icam1P13597 537 aaKnown RBP21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Ccl4P14097 92 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 F3P20352 294 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Gja1P23242 382 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 VdrP48281 422 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Fam47cQ14BE7 430 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Naf1Q3UMQ8 489 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Fam8a1Q3URQ4 399 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Drc1Q3USS3 753 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Spata24Q6P926 205 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Pacs1Q8K212 961 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Adgrf1Q8VEC3 908 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Olfr371Q8VGB8 312 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Nrif1Q923B3 828 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Xpo6Q924Z6 1125 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Rnf146Q9CZW6 359 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Ppil6Q9D6D8 278 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Ten1Q9D7K2 161 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 SyncQ9EPM5 470 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Tmem115Q9WUH1 350 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Mpp2Q9WV34 552 aa21.36■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Fam43bA2AM80 330 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Gm5930D3Z257 264 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Bmpr2O35607 1038 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 CtssO70370 340 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Epas1P97481 874 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Caprin2Q05A80 1031 aaKnown RBP21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Rtel1Q0VGM9 1203 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Mif4gdQ3UBZ5 222 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Cog7Q3UM29 770 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Rap1gap2Q5SVL6 712 aaKnown RBP21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Tnfaip2Q61333 691 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Ripor1Q68FE6 1223 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 ItpkcQ7TS72 678 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Adam29Q811Q4 763 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Hacd3Q8K2C9 362 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 OlahQ8R197 265 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Atg10Q8R1P4 215 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Olfr846Q8VET8 312 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Cdc26Q99JP4 85 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Dok4Q99KE3 325 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Tspan11Q9D1D1 253 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 RhoaQ9QUI0 193 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Ptch2O35595 1182 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Srpk1O70551 648 aaKnown RBP21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Bmp8aP34821 399 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Hsd17b4P51660 735 aaKnown RBP21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Fgf13P70377 245 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Irx2P81066 474 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Fam35aQ3UEN2 891 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Snx21Q3UR97 363 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Lrrc8bQ5DU41 803 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Mtnr1aQ61184 353 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Abcd2Q61285 741 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Exoc3l4Q6DIA2 721 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Olfr1062Q7TR71 315 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Olfr667Q7TRP4 326 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Fam72aQ8BFZ8 149 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Zc2hc1cQ8CCG1 527 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Cwf19l1Q8CI33 537 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Ndufs1Q91VD9 727 aaKnown RBP21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 DcxrQ91X52 244 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Sytl1Q99N80 567 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Fcf1Q9CTH6 198 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 IgtpQ9DCE9 423 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Cldn19Q9ET38 224 aa21.35■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Kiaa1522A2A7S8 1013 aa21.34■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Zfp952B0V2W4 504 aa21.34■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Syngr1O55100 234 aa21.34■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Stx7O70439 261 aa21.34■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Ybx1P62960 322 aaKnown RBP21.34■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 AurkaP97477 395 aa21.34■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Prss55Q14BX2 321 aa21.34■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Ermp1Q3UVK0 898 aaKnown RBP21.34■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Trcg1Q58Y74 825 aa21.34■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Slc39a10Q6P5F6 833 aa21.34■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Hmgb4Q6P8W9 181 aa21.34■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 AtminQ6P9S1 818 aa21.34■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Ints6Q6PCM2 883 aa21.34■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 AslQ91YI0 464 aa21.34■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Ackr4Q924I3 350 aa21.34■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Asap1Q9QWY8 1147 aa21.34■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms