RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Gprc5dQ9JIL6 344 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Med20Q9R0X0 212 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Slfn2Q9Z0I6 378 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gm6370A0A0G2JGX9 315 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Vmn1r2A2AMT6 306 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Slfn9B1ARD6 910 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Vmn2r27D3YUK6 857 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Zfp882E9Q4R4 555 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Pcsk6F6XJP7 959 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gm6309L7N481 315 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 P01652 108 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Tsta3P23591 321 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Lim2P56563 173 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Txnl4aP83877 142 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 StacP97306 403 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Six4Q61321 775 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Tmem130Q6NXM3 419 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Tlr12Q6QNU9 906 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fam120bQ6RI63 786 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gja6Q6S5G4 283 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cspg5Q71M36 566 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Olfr1062Q7TR71 315 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 StgQ8BM15 349 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Arhgap28Q8BN58 729 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rmdn2Q8BSE0 410 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Kcnv1Q8BZN2 503 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Sfrp1Q8C4U3 314 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 HscbQ8K3A0 234 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 GrpQ8R1I2 146 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fbxo21Q8VDH1 627 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Pcdhb11Q91UZ8 797 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Psip1Q99JF8 528 aaKnown RBP13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Nipsnap3bQ9CQE1 247 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Tnfaip8l2Q9D8Y7 184 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Timp4Q9JHB3 224 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Smpd3Q9JJY3 655 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rnf11Q9QYK7 154 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 NbnQ9R207 751 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Zc3h4Q6ZPZ3 1304 aaKnown RBP13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Pcdh15Q99PJ1 1943 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Eif2b3B1AUN2 452 aaKnown RBP13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gm5930D3Z257 264 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cntnap3E9PY62 1287 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Srp72F8VQC1 671 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Pot1bH7BX60 640 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 MrasO08989 208 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Per3O70361 1113 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Got2P05202 430 aaKnown RBP13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cyp2a12P56593 492 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Htr4P97288 388 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 MylpfP97457 169 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ankrd13bQ5F259 626 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Serpina3gQ5I2A0 440 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Olfr463Q5SW49 311 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Olfr462Q5SW50 311 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 MafkQ61827 156 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 DazlQ64368 298 aaKnown RBP13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Trit1Q80UN9 467 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 R3hcc1lQ8BJM3 775 aaKnown RBP13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Mterf2Q8BKY8 385 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ttc34Q8C0Q3 554 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Pcolce2Q8R4W6 414 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 B4galt3Q91YY2 395 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Slc35b2Q91ZN5 431 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 4930524N10RikQ9D519 233 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Syde1Q9DBZ9 737 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cyp4f14Q9EP75 524 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Grin3aA2AIR5 1135 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Kcnt2D3Z649 1135 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Zfp358E9Q8M1 571 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gm43302L7N1X8 611 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cyp27b1O35084 507 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fpr-rs3O88537 343 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Dpep1P31428 410 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Il12bP43432 335 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Anxa5P48036 319 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gpc4P51655 557 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 AurkaP97477 395 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gbp10Q000W5 611 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Dnajb14Q149L6 379 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fam171bQ14CH0 825 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fscn2Q32M02 492 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rnf157Q3TEL6 685 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Slc16a10Q3U9N9 512 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Slc22a23Q3UHH2 689 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Tpd52Q62393 224 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fastkd1Q6DI86 829 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rps27lQ6ZWY3 84 aaKnown RBP13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Clec18aQ7TSQ1 534 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Tecpr1Q80VP0 1166 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Tmem121Q80XA0 318 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Traf3ip2Q8N7N6 555 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 CtsqQ91ZF4 343 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Tnip2Q99JG7 430 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Snrpb2Q9CQI7 225 aaKnown RBP13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rrp15Q9CYX7 281 aaKnown RBP13□□□□□ -0.33
Nup88-203ENSMUST00000108531 CrotQ9DC50 612 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Olfr711Q9EPG2 314 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rhox9Q9EQM5 227 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Doc2gQ9ESN1 387 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 52.5 ms