RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Spp1P10923 294 aaKnown RBP16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Nat14Q8BVG8 206 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Lgals12Q91VD1 314 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Wdr73Q9CWR1 371 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Acbd7Q9D258 88 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Q9D4A5 307 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Il22bQ9JJY8 179 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 March10E9PX79 788 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 R3hcc1lQ8BJM3 775 aaKnown RBP16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gpr180Q8BPS4 441 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Arhgef3Q91X46 524 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Ing1Q9QXV3 279 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Itga8A2ARA8 1062 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gabrb2P63137 512 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Bend6Q6PFX2 281 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Depdc1aQ8CIG0 804 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Vmn1r218Q8R261 298 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 RergQ8R367 199 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Rnf135Q9CWS1 417 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Mtx3D3YTP3 312 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Mapk12O08911 367 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Anxa6P14824 673 aaKnown RBP16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Alox12P39655 663 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Snap91Q61548 901 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Atxn7Q8R4I1 867 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 DnpepQ9Z2W0 473 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 DgkhD3YXJ0 1156 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Apold1E9Q0X2 246 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 LeprP48356 1162 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Snrpd1P62315 119 aaKnown RBP16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Rab26Q504M8 260 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Serpina3gQ5I2A0 440 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Zdhhc20Q5Y5T1 380 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Npy5rO70342 466 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Serac1Q3U213 654 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Cdc14bQ6PFY9 485 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Fnip2Q80TD3 1108 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Ftsj1Q8CBC7 324 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Pcdhb19Q91Y01 801 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Chid1Q922Q9 393 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Kdelr1Q99JH8 212 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Tpra1Q99MU1 369 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Syvn1Q9DBY1 612 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Ssxb8B1AY40 170 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Hmx1O70218 332 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Magea5O89009 320 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Magea8O89012 320 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Lilrb3P97484 841 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Cspg5Q71M36 566 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Atxn2lQ7TQH0 1049 aaKnown RBP16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Zbtb24Q80X44 710 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 NbnQ9R207 751 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Fam205a1D3YZF6 1314 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Fbrsl1E9Q9T0 1031 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Klhl33G3UW92 533 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Rdh13Q8CEE7 334 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Sbk1Q8QZX0 417 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Oxnad1Q8VE38 311 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Olfr1484Q8VEU6 315 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Aldh9a1Q9JLJ2 494 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 RptorQ8K4Q0 1335 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Catsperg2C6KI89 1145 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Mtnd4P03911 459 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Adra1dP97714 562 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 ThrbP37242 461 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gpat3Q8C0N2 438 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 MmadhcQ99LS1 296 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Spg21Q9CQC8 308 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Mcemp1Q9D8U6 183 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Fkbp9Q9Z247 570 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Espl1P60330 2118 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Bub1O08901 1058 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Ifi203O35368 408 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 RfkQ8CFV9 155 aa16.68■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Ttll3A4Q9E5 927 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Cyp2c39P56656 490 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Glp2rQ5IXF8 512 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 S100a15aQ6S5I3 108 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Saysd1Q8K190 188 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Fam83aQ8K2P2 436 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Adam17Q9Z0F8 827 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 CroccQ8CJ40 2009 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 AladP10518 330 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Nckap1P28660 1128 aaKnown RBP16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Ddr1Q03146 911 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Fscn1Q61553 493 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Snapc2Q91XA5 359 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 DguokQ9QX60 277 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Cyp17a1P27786 507 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Aldh3a2P47740 484 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Bace1P56818 501 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Phf8Q80TJ7 1023 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Mgat4aQ812G0 535 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Slc25a12Q8BH59 677 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Btnl9Q8BJE2 536 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Slc26a5Q99NH7 744 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Rpl9-ps1S4R1R7 191 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gm21319F6YNI8 144 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Lats2Q7TSJ6 1042 aa16.67■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Lrrc27Q80YS5 523 aa16.67■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms