RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Klhl4B1AZR0 717 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gm5930D3Z257 264 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Kbtbd6E9PYD7 486 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Kbtbd7G5E8C2 690 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gm3336J3QMQ6 198 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 JchainP01592 159 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Hk1P17710 974 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Mc4rP56450 332 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Tial1P70318 392 aaKnown RBP13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 AnpepP97449 966 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Hbq1bQ3U0A6 142 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Otud5Q3U2S4 566 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Slc22a23Q3UHH2 689 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Cep295nlQ497N6 533 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gpsm1Q6IR34 673 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Krt73Q6NXH9 539 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Mpp4Q6P7F1 635 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 HomezQ80W88 542 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Dlgap2Q8BJ42 1059 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Slc47a1Q8K0H1 567 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Dclre1cQ8K4J0 705 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Vmn1r79Q8R285 306 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Pcdhgc3Q91XX1 934 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 HnrnpabQ99020 285 aaKnown RBP13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Smim11aQ99J19 55 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Snrpb2Q9CQI7 225 aaKnown RBP13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Leng1Q9DB98 261 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Bmp15Q9Z0L4 392 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Zbtb12Q9Z150 459 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 4930426L09RikE9Q0N7 123 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ap3d1O54774 1199 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 PolP11369 1281 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Tsta3P23591 321 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Hmx2P43687 273 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gpc4P51655 557 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 AurkaP97477 395 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ankrd34bQ3UUF8 508 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Fbxw11Q5SRY7 542 aaKnown RBP13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Cln3Q61124 438 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Sox17Q61473 419 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 ChpfQ6IQX7 774 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Mppe1Q80XL7 396 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Amigo1Q80ZD8 492 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 VcpkmtQ8C436 228 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Sik2Q8CFH6 931 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Tada2aQ8CHV6 443 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 ClmpQ8R373 373 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Pth2rQ91V95 546 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Dennd2dQ91VV4 469 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 PdgfdQ925I7 370 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Raver1Q9CW46 748 aaKnown RBP13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Hnrnpa0Q9CX86 305 aaKnown RBP13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Q9D4A5 307 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ighg3A0A1Y7VJN6 399 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Olfr1049A2ARZ0 308 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Vmn2r74E9PW21 853 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 ClppO88696 272 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 PlaaP27612 794 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Btg3P50615 252 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Lim2P56563 173 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Dpf3P58269 378 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Sephs2P97364 452 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Pla2g5P97391 137 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Mc1rQ01727 315 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Tex24Q5DP50 351 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Osbp2Q5QNQ6 908 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Lag3Q61790 521 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Sema4aQ62178 760 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Fndc3bQ6NWW9 1207 aaKnown RBP13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ssxb3Q6XAS4 170 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Olfr212Q7TS33 327 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 IfneQ80ZF2 192 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Dlk2Q8K1E3 382 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Golm1Q91XA2 393 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 NamptQ99KQ4 491 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Lrrc4Q99PH1 652 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Taf1dQ9D4V4 322 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Htr3bQ9JHJ5 437 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Cngb3Q9JJZ9 694 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Plagl1Q9JLQ4 704 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ap1m2Q9WVP1 423 aa13.52□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gm10424A0A0J9YVD0 481 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm7971J3QMM8 481 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Il4i1O09046 630 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Kcnc1P15388 511 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Psmd7P26516 321 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Htr2cP34968 459 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 F8a1Q00558 380 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Yy2Q3TTC2 378 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Mpzl3Q3V3F6 237 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Rabl6Q5U3K5 725 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Naa50Q6PGB6 169 aaKnown RBP13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Scd4Q6T707 353 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Rad9bQ6WBX7 403 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Zfp606Q7TSV0 794 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Tspan18Q80WR1 248 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Snx32Q80ZJ7 404 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Lca5lQ8C0X0 741 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Acsm2Q8K0L3 575 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Epm2aip1Q8VEH5 606 aa13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms