RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Stk40Q7TNL3 435 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Mib1Q80SY4 1006 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 R3hcc1lQ8BJM3 775 aaKnown RBP10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Cpne3Q8BT60 533 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ankrd52Q8BTI7 1076 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Slc35a5Q921R7 437 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Tbc1d21Q9D9D3 336 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Sf3b1Q99NB9 1304 aaKnown RBP10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ankrd31A0A140LI88 1765 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 1600015I10RikE9Q745 711 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 4930544D05RikJ3QK56 214 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Mup13L7N222 235 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Vmn2r44L7N2E1 861 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Hes2O54792 157 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Htr2cP34968 459 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Vps26aP40336 327 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Q32M26 199 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Atg16l2Q6KAU8 623 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ssx9Q6XAS3 170 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Slc39a14Q75N73 489 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Clptm1lQ8BXA5 539 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Zfp120Q8BZW4 436 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Sgip1Q8VD37 806 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Socs4Q91ZA6 436 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ctu1Q99J10 420 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ergic3Q9CQE7 383 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Sppl3Q9CUS9 384 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 4930524N10RikQ9D519 233 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 DiabloQ9JIQ3 237 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 PolhQ9JJN0 694 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Adgra2Q91ZV8 1336 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gm27029A2A4P4 543 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ssxb8B1AY40 170 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gm10801F7C7Q0 168 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Vmn2r67K7N6T2 851 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Yme1l1O88967 715 aaKnown RBP9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Tespa1Q3U132 458 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Sel1l2Q3V172 688 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Phf21aQ6ZPK0 659 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Trpm4Q7TN37 1213 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Them6Q80ZW2 207 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Tmem169Q8BG50 297 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Mettl3Q8C3P7 580 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Parp9Q8CAS9 866 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Q8CD60 292 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Fastkd2Q922E6 689 aaKnown RBP9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Pwp1Q99LL5 501 aaKnown RBP9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Q9CQC3 228 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Atp5f1Q9CQQ7 256 aaKnown RBP9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Nusap1Q9ERH4 427 aaKnown RBP9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Pld1Q9Z280 1074 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 SmoktcrA2KF29 484 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Skint7A7XV04 395 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 D3Z070 196 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Vmn2r19G5E8G4 854 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 LgmnO89017 435 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Akt1P31750 480 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Trpv5P69744 723 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Abl2Q4JIM5 1182 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ankrd13bQ5F259 626 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 OgdhQ60597 1023 aaKnown RBP9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Itih2Q61703 946 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 KdsrQ6GV12 332 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Cspg5Q71M36 566 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Qsox1Q8BND5 748 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Slc9a4Q8BUE1 797 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Zbtb8bQ8CII0 484 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Lurap1lQ8K2P1 221 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Mlc1Q8VHK5 382 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Lgals12Q91VD1 314 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Nsmce2Q91VT1 247 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Far1Q922J9 515 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 CatsperzQ9CQP8 194 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ccdc163A2AGD7 326 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Zfp990B1AVN5 605 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 FanceB8JJD6 213 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Slc9a3G3X939 829 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Sema6aO35464 1031 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Guca1aP43081 202 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 PrkcqQ02111 707 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Pi4k2aQ2TBE6 479 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Pik3r6Q3U6Q4 756 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 KizQ3UXL4 695 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gpsm1Q6IR34 673 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Rexo4Q6PAQ4 432 aaKnown RBP9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ssxb3Q6XAS4 170 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ttc23Q8CHY7 488 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Uroc1Q8VC12 676 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Mtif2Q91YJ5 727 aaKnown RBP9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 CmasQ99KK2 432 aaKnown RBP9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Yaf2Q99LW6 179 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 TfgQ9Z1A1 397 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Umodl1Q5DID3 1319 aa9.99□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gm3147A0A0J9YU88 481 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gm10424A0A0J9YVD0 481 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ttc23lA6H6E9 458 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gm8369E9PZI3 166 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gm7971J3QMM8 481 aa9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Sdc4O35988 198 aaKnown RBP9.98□□□□□ -0.81
Ldlr-201ENSMUST00000034713 PlaaP27612 794 aa9.98□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms