RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 PolkQ9QUG2 852 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 TprnA2AI08 749 aaKnown RBP12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Dhtkd1A2ATU0 921 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Krt83E9Q1Y9 479 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Chrna4O70174 629 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Ap2a1P17426 977 aaKnown RBP12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Fitm2P59266 262 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 PrkacbP68181 351 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Klra8Q60682 266 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Tmem45aQ60774 273 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Cyp3a16Q64481 504 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Fnip1Q68FD7 1165 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Klhl26Q8BGY4 606 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 TdrpQ8C5P7 182 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Spdye4bQ8CDE8 236 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Cldn22Q9D7U6 220 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 St6galnac1Q9QZ39 526 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Kcnq2Q9Z351 759 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Gm28363A0A087WQW2 129 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Pole2O54956 527 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Trpv5P69744 723 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Bop1P97452 732 aaKnown RBP12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Nutm2Q3V0C3 733 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Mapre1Q61166 268 aaKnown RBP12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Arl5cQ6P068 179 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Rexo4Q6PAQ4 432 aaKnown RBP12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Vps37aQ8CHS8 397 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Gsto2Q8K2Q2 248 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Sgpl1Q8R0X7 568 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 NclnQ8VCM8 563 aaKnown RBP12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Chchd6Q91VN4 273 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 CenpsQ9D084 142 aa12.76□□□□□ -0.37
Msh6-201ENSMUST00000005503 Topaz1E5FYH1 1653 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 4930444G20RikD3Z741 495 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Impdh2P24547 514 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Nr5a2P45448 560 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 CratP47934 626 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 DbtP53395 482 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Rad54bQ6PFE3 886 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Cnpy4Q8BQ47 245 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 BoraQ8BS90 525 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Ssh3Q8K330 649 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Eif3lQ8QZY1 564 aaKnown RBP12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Cdhr5Q8VHF2 831 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 PrkxQ922R0 355 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Klhl35Q9CZ49 574 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Kdelc1Q9JHP7 502 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Tnfsf13bQ9WU72 309 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Rhox3cA2AWM0 215 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Kcng1A2BDX4 514 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Aldoart1A6ZI46 419 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Mkrn2osD3Z393 217 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Vmn2r5K7N788 911 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Rhox3hL7MU37 215 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Rgs4O08899 205 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 P01740 135 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Irf3P70671 419 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Ankrd27Q3UMR0 1048 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Rhox3aQ4TU90 215 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Rfx4Q7TNK1 735 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Pnma8aQ80VM8 430 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Ppm1nQ8BGL1 404 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Q8BH50 245 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Gpc1Q9QZF2 557 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Gm5152L7N200 190 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Stx7O70439 261 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Tgfb2P27090 414 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Cct7P80313 544 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Msi1Q61474 362 aaKnown RBP12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Prmt6Q6NZB1 378 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Sez6lQ6P1D5 963 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Deup1Q7M6Y5 601 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Olfr1062Q7TR71 315 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Fbxw21Q8BI38 468 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Hspa13Q8BM72 471 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Arhgap25Q8BYW1 648 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Asrgl1Q8C0M9 326 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Zbtb8bQ8CII0 484 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Ero1bQ8R2E9 467 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Glis2Q8VDL9 521 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Trim33Q99PP7 1142 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Ifi44lQ9BDB7 447 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 AgkQ9ESW4 421 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Cacng4Q9JJV4 327 aa12.75□□□□□ -0.37
Msh6-201ENSMUST00000005503 Gm6509A0A0J9YUV1 481 aa12.74□□□□□ -0.37
Msh6-201ENSMUST00000005503 Ism1A2ATD1 454 aa12.74□□□□□ -0.37
Msh6-201ENSMUST00000005503 Gm6811E9Q3Y8 510 aa12.74□□□□□ -0.37
Msh6-201ENSMUST00000005503 Gm10722F6VLK5 217 aa12.74□□□□□ -0.37
Msh6-201ENSMUST00000005503 Gm17093F6XGJ4 214 aa12.74□□□□□ -0.37
Msh6-201ENSMUST00000005503 TpteG5E8H5 664 aa12.74□□□□□ -0.37
Msh6-201ENSMUST00000005503 Gm6351K9J7D1 481 aa12.74□□□□□ -0.37
Msh6-201ENSMUST00000005503 RapsnP12672 412 aa12.74□□□□□ -0.37
Msh6-201ENSMUST00000005503 Akt1P31750 480 aa12.74□□□□□ -0.37
Msh6-201ENSMUST00000005503 InaP46660 501 aa12.74□□□□□ -0.37
Msh6-201ENSMUST00000005503 LeprP48356 1162 aa12.74□□□□□ -0.37
Msh6-201ENSMUST00000005503 Snx27Q3UHD6 539 aa12.74□□□□□ -0.37
Msh6-201ENSMUST00000005503 Cyp2c66Q5GLZ0 490 aa12.74□□□□□ -0.37
Msh6-201ENSMUST00000005503 Tas2r106Q7M724 308 aa12.74□□□□□ -0.37
Msh6-201ENSMUST00000005503 Mis18bp1Q80WQ8 998 aa12.74□□□□□ -0.37
Msh6-201ENSMUST00000005503 RtknQ8C6B2 564 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms