RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Ybx1P62960 322 aaKnown RBP16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Armcx5Q3UZB0 606 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Pla2g4dQ50L43 825 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Mfsd3Q5U419 412 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 HltfQ6PCN7 1003 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Rfx4Q7TNK1 735 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Tmem220Q8BP07 167 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Ano4Q8C5H1 955 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Aqp12Q8CHJ2 290 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Nsl1Q8K305 281 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Pcdhb17Q91VD8 799 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Atpaf2Q91YY4 289 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Ddit4Q9D3F7 229 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Plagl1Q9JLQ4 704 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Trpc7Q9WVC5 862 aa16.56■□□□□ 0.24
Shh-201ENSMUST00000002708 Wdr49A0A0N4SUK7 710 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Usp51B1AY15 661 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Mtx3D3YTP3 312 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Nlrp12E9Q5R7 1054 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Gm3383J3QQ59 259 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Gm3239L7N2D9 227 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 NmbrO54799 390 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Pag1Q3U1F9 429 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Msi1Q61474 362 aaKnown RBP16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Mef2dQ63943 514 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Smpd4Q6ZPR5 823 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Pramel7Q810Y8 479 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Znf784Q8BI69 297 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 RtknQ8C6B2 564 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Samd4aQ8CBY1 711 aaKnown RBP16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 PvrQ8K094 408 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Sbk1Q8QZX0 417 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Sytl2Q99N50 950 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Oxct1Q9D0K2 520 aaKnown RBP16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Bcas2Q9D287 225 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Rps6ka2Q9WUT3 733 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Klhdc7bA0A286YD60 1263 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Ankrd16A2AS55 361 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 JhyE9Q793 770 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Anxa5P48036 319 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Cyb5r2Q3KNK3 276 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Ntrk1Q3UFB7 799 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 StyxQ60969 223 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Tgm6Q8BM11 706 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Tp53bp2Q8CG79 1128 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Cybrd1Q925G2 290 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Asah2Q9JHE3 756 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Abhd1Q9QZC8 412 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Gm5751A2AHC8 147 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Ssxb8B1AY40 170 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 FgaE9PV24 789 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 H2-Eb1P04230 264 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Impdh2P24547 514 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Psme3P61290 254 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Serpina5P70458 405 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Fam117bQ3U3E2 584 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Ggnbp1Q6K1E7 370 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Ssx9Q6XAS3 170 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Tas2r129Q7M709 320 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 MroQ7TNB4 248 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Ints7Q7TQK1 966 aaKnown RBP16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Olfr1046Q7TR79 316 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Olfr867Q7TRF3 331 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Gtse1Q8R080 741 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Neurl2Q9D0S4 285 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Fam162aQ9D6U8 155 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 Sept6Q9R1T4 434 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 ApipQ9WVQ5 241 aa16.55■□□□□ 0.24
Shh-201ENSMUST00000002708 CercamA3KGW5 592 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Gm5160F8VPN3 147 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Gm20503G3UZK1 150 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Fam167bP17257 162 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 YwhaqP68254 245 aaKnown RBP16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 AurkaP97477 395 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Fam171bQ14CH0 825 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Cd163Q2VLH6 1121 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Ddx4Q61496 702 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Itih1Q61702 907 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Zfp90Q61967 636 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Dennd2cQ6P9P8 914 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Sarm1Q6PDS3 724 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Zbtb6Q8K088 423 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Slamf1Q9QUM4 343 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Ap4b1Q9WV76 738 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Arrdc4A0A0B4J1F4 415 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Ighg3A0A1Y7VJN6 399 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Vmn1r2A2AMT6 306 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Akain1G3UWD5 69 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Vmn2r88L7N1W8 857 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Vmn2r61L7N2B8 865 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Top3aO70157 1003 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Hoxc8P09025 242 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Dpf3P58269 378 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Q32M26 199 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Six4Q61321 775 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Prkaa2Q8BRK8 552 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Csnk1g1Q8BTH8 459 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Sept10Q8C650 452 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Slfn5Q8CBA2 884 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Spdye4bQ8CDE8 236 aa16.54■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 44.1 ms