RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 PAXBP1Q9Y5B6 917 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 CAPN6Q9Y6Q1 641 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 IGLV3-10A0A075B6K4 115 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 A0A1W2PP55 124 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 GRID2IPA4D2P6 1211 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 F5H5T6 163 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 TLR4O00206 839 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 PRPSAP2O60256 369 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 OPA1O60313 960 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 TBL1XO60907 577 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 RNF8O76064 485 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 CNTN5O94779 1100 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 LRIG2O94898 1065 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 MOCS3O95396 460 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 ITGAVP06756 1048 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 DLDP09622 509 aaKnown RBP7.55□□□□□ -1.2
PHGDH-225ENST00000641720 CCDC175P0C221 793 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 PABPC1P11940 636 aaKnown RBP7.55□□□□□ -1.2
PHGDH-225ENST00000641720 COMTP21964 271 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 NOP2P46087 812 aaKnown RBP7.55□□□□□ -1.2
PHGDH-225ENST00000641720 NUMBP49757 651 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 GABREP78334 506 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 KRT83P78385 493 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 NRG1Q02297 640 aaPredicted RBP7.55□□□□□ -1.2
PHGDH-225ENST00000641720 CST6Q15828 149 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 C5orf22Q49AR2 442 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 FNDC3BQ53EP0 1204 aaKnown RBP7.55□□□□□ -1.2
PHGDH-225ENST00000641720 MPPE1Q53F39 396 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 ALFQ53S48 1182 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 FSCBQ5H9T9 825 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 EFHC2Q5JST6 749 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 TMCO4Q5TGY1 634 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 CXorf57Q6NSI4 855 aaKnown RBP7.55□□□□□ -1.2
PHGDH-225ENST00000641720 KDM7AQ6ZMT4 941 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 TFAP2DQ7Z6R9 452 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 TMEM145Q8NBT3 493 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 OR52K2Q8NGK3 314 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 OR2T34Q8NGX1 318 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 OR4C6Q8NH72 309 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 DDI1Q8WTU0 396 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 KCNE4Q8WWG9 221 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 HSPH1Q92598 858 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 RPRD1AQ96P16 312 aaPredicted RBP7.55□□□□□ -1.2
PHGDH-225ENST00000641720 DPH1Q9BZG8 443 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 ZWILCHQ9H900 591 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 GDF3Q9NR23 364 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.55□□□□□ -1.2
PHGDH-225ENST00000641720 UCKL1Q9NWZ5 548 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 FBXL12Q9NXK8 326 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 STIM2Q9P246 746 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 ZNF212Q9UDV6 495 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 SLC12A6Q9UHW9 1150 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 GGA2Q9UJY4 613 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 SCML1Q9UN30 329 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 OTOGQ6ZRI0 2925 aa7.55□□□□□ -1.2
PHGDH-225ENST00000641720 CSMD2Q7Z408 3487 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 TCAF2A6NFQ2 919 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 USP27XA6NNY8 438 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 SUV39H1O43463 412 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 CREB3O43889 395 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 NOBOXO60393 691 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 SRGAP2O75044 1071 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 SDC3O75056 442 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 LUC7L3O95232 432 aaKnown RBP7.54□□□□□ -1.2
PHGDH-225ENST00000641720 DNTTP04053 509 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 CYBBP04839 570 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 CD48P09326 243 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 RARAP10276 462 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 MYF5P13349 255 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 GOT1P17174 413 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 DESP17661 470 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 L1CAMP32004 1257 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 CTSOP43234 321 aaPredicted RBP7.54□□□□□ -1.2
PHGDH-225ENST00000641720 SSR1P43307 286 aaKnown RBP7.54□□□□□ -1.2
PHGDH-225ENST00000641720 ARSEP51690 589 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 AIF1P55008 147 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 C21orf59P57076 290 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 TAS2R38P59533 333 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 NFKB2Q00653 900 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 KIF5AQ12840 1032 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 SRSF6Q13247 344 aaKnown RBP7.54□□□□□ -1.2
PHGDH-225ENST00000641720 CLN3Q13286 438 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 ZNF211Q13398 564 aaPredicted RBP7.54□□□□□ -1.2
PHGDH-225ENST00000641720 ARL13BQ3SXY8 428 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 TTC31Q49AM3 519 aaPredicted RBP7.54□□□□□ -1.2
PHGDH-225ENST00000641720 ATP13A4Q4VNC1 1196 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 PPP6R3Q5H9R7 873 aaPredicted RBP7.54□□□□□ -1.2
PHGDH-225ENST00000641720 RABGAP1LQ5R372 815 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 NAPEPLDQ6IQ20 393 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 CLEC14AQ86T13 490 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 IQCHQ86VS3 1027 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 NLRP14Q86W24 1093 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 MFN1Q8IWA4 741 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 AHI1Q8N157 1196 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 CCAR2Q8N163 923 aaKnown RBP7.54□□□□□ -1.2
PHGDH-225ENST00000641720 CARNMT1Q8N4J0 409 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 MFSD2AQ8NA29 543 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 TEKT4Q8WW24 435 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 KRT35Q92764 455 aa7.54□□□□□ -1.2
PHGDH-225ENST00000641720 PTPRN2Q92932 1015 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms