RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	POLD4	Q9HCU8	107 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	SLC2A4RG	Q9NR83	387 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	GDE1	Q9NZC3	331 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	SEL1L	Q9UBV2	794 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	TBX20	Q9UMR3	447 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	EXOC7	Q9UPT5	735 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	WDR87	Q6ZQQ6	2873 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	DOCK8	Q8NF50	2099 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	TTC26	A0AVF1	554 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	PABPN1L	A6NDY0	278 aa	Known RBP	6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	MROH6	A6NGR9	719 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	OR6C75	A6NL08	312 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	CXorf49	A8MYA2	514 aa	Predicted RBP	6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	MATN2	O00339	956 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	CCL16	O15467	120 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	N4BP1	O75113	896 aa	Known RBP	6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	PDGFB	P01127	241 aa	Predicted RBP	6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	CXCL8	P10145	99 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	TSHR	P16473	764 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	GAP43	P17677	238 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	KCNJ5	P48544	419 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	NOMO3	P69849	1222 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	TSPY1	Q01534	308 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	YWHAH	Q04917	246 aa	Predicted RBP	6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	TCF15	Q12870	199 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	BLMH	Q13867	455 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	POSTN	Q15063	836 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	FAM214A	Q32MH5	1076 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	ANKS6	Q68DC2	871 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	CCDC73	Q6ZRK6	1079 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	CCDC105	Q8IYK2	499 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	BEST2	Q8NFU1	509 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	FGF13	Q92913	245 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	ATP6V1E2	Q96A05	226 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	MSTO1	Q9BUK6	570 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	TRIM54	Q9BYV2	358 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	UNK	Q9C0B0	810 aa	Known RBP	6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	ST6GALNAC4	Q9H4F1	302 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	ASB7	Q9H672	318 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	RPF1	Q9H9Y2	349 aa	Known RBP	6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	GOLGA2P5	Q9HBQ8	144 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	PNPLA8	Q9NP80	782 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	ARHGEF3	Q9NR81	526 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	SIDT1	Q9NXL6	827 aa	Known RBP	6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	CACNG4	Q9UBN1	327 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	AFF4	Q9UHB7	1163 aa	Known RBP	6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	DERA	Q9Y315	318 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	CIT	O14578	2027 aa		6.6	□□□□□ -1.35
CASC19-238	ENST00000641523	MTCL1	Q9Y4B5	1905 aa	Known RBP	6.59	□□□□□ -1.35
CASC19-238	ENST00000641523		A0A0B4J269	797 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	SMTNL1	A8MU46	457 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	TISP43	B9A030	160 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523		B9A039	149 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	PROB1	E7EW31	1015 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523		M0QZQ0	153 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	FOXN3	O00409	490 aa	Predicted RBP	6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	OAZ2	O95190	189 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	IL18RAP	O95256	599 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	DHRS4L1	P0CG22	281 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	MTHFD1	P11586	935 aa	Known RBP	6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	PTPN2	P17706	415 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	TYMP	P19971	482 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	PIK3CA	P42336	1068 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	MAGEA9	P43362	315 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	BRCC3	P46736	316 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	AARS	P49588	968 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	ARFIP2	P53365	341 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	LINC00310	P59036	64 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	GTF2B	Q00403	316 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	DAG1	Q14118	895 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	KARS	Q15046	597 aa	Known RBP	6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	CCNG2	Q16589	344 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	FKBP15	Q5T1M5	1219 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	CYP4A22	Q5TCH4	519 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	HIBCH	Q6NVY1	386 aa	Predicted RBP	6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	ZNF529	Q6P280	563 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	SEM1	Q6ZVN7	128 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	STXBP4	Q6ZWJ1	553 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	FRMD5	Q7Z6J6	570 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	RNF152	Q8N8N0	203 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	TMEM105	Q8N8V8	129 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	IL17RD	Q8NFM7	739 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	SLC30A5	Q8TAD4	765 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	KBTBD7	Q8WVZ9	684 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	BORCS6	Q96GS4	357 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	ZBTB45	Q96K62	511 aa	Predicted RBP	6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	GPR88	Q9GZN0	384 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	EPC1	Q9H2F5	836 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	C12orf65	Q9H3J6	166 aa	Known RBP	6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	CYP4F11	Q9HBI6	524 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	NKIRAS2	Q9NYR9	191 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	FBXL5	Q9UKA1	691 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	PCDHGB2	Q9Y5G2	931 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	SRPRB	Q9Y5M8	271 aa	Known RBP	6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	INSL5	Q9Y5Q6	135 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	GPR179	Q6PRD1	2367 aa		6.59	□□□□□ -1.35
CASC19-238	ENST00000641523	C2orf16	Q68DN1	1984 aa		6.58	□□□□□ -1.36
CASC19-238	ENST00000641523	CEP250	Q9BV73	2442 aa		6.58	□□□□□ -1.36
CASC19-238	ENST00000641523	PLXNA3	P51805	1871 aa		6.58	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms