RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 PHTF1Q9UMS5 762 aa-0.98□□□□□ -2.57
CDKL5-210ENST00000636046 DRG1Q9Y295 367 aaKnown RBP-0.98□□□□□ -2.57
CDKL5-210ENST00000636046 ZNF510Q9Y2H8 683 aa-0.98□□□□□ -2.57
CDKL5-210ENST00000636046 SUGT1Q9Y2Z0 365 aa-0.98□□□□□ -2.57
CDKL5-210ENST00000636046 STYXL1Q9Y6J8 313 aa-0.98□□□□□ -2.57
CDKL5-210ENST00000636046 SEC23IPQ9Y6Y8 1000 aaKnown RBP-0.98□□□□□ -2.57
CDKL5-210ENST00000636046 KDM2BQ8NHM5 1336 aa-0.98□□□□□ -2.57
CDKL5-210ENST00000636046 ZNF335Q9H4Z2 1342 aaPredicted RBP-0.98□□□□□ -2.57
CDKL5-210ENST00000636046 RPAP1Q9BWH6 1393 aaPredicted RBP-0.98□□□□□ -2.57
CDKL5-210ENST00000636046 DOCK10Q96BY6 2186 aa-0.98□□□□□ -2.57
CDKL5-210ENST00000636046 TACC2O95359 2948 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 LMTK3Q96Q04 1460 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 DLG5Q8TDM6 1919 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 IGLV4-69A0A075B6H9 119 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 A0A087WZG4 1122 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 A0A0U1RQG5 324 aaPredicted RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 SLC22A23A1A5C7 686 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 LCHNA4D1U4 455 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 PRAMEF25A6NGN4 478 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 A6NL46 340 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 NPIPB5A8MRT5 1133 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 A8MX80 341 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 KDM4EB2RXH2 506 aaPredicted RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 NPIPB4C9JG80 1138 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 F5H697 171 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 SLCO1B7G3V0H7 640 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 TOR1BO14657 336 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 MRPS12O15235 138 aaKnown RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 PJA2O43164 708 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 TGM5O43548 720 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 DNAJA2O60884 412 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 RCBTB2O95199 551 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 IGLV6-57P01721 117 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 IGHG3P01860 377 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 HMBSP08397 361 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 IGFBP1P08833 259 aaPredicted RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 MRPL3P09001 348 aaKnown RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 SNRPA1P09661 255 aaKnown RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 ZSCAN5DPP0CG00 497 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 GAAP10253 952 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 ITGA4P13612 1032 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 ZNF182P17025 639 aaPredicted RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 KCNA6P17658 529 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 PTPN1P18031 435 aaKnown RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 EGR1P18146 543 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 HNRNPH1P31943 449 aaKnown RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 DCTP40126 519 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 NPTX2P47972 431 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 SLC6A9P48067 706 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 CLCN2P51788 898 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 PRKAA2P54646 552 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 GYS2P54840 703 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 GNB2P62879 340 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 NOMO3P69849 1222 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 ARHGAP8P85298 464 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 AMPD2Q01433 879 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 ATP2B2Q01814 1243 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 EHHADHQ08426 723 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 CD300CQ08708 224 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 FAM27E3Q08E93 113 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 PRDX4Q13162 271 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 SRSF6Q13247 344 aaKnown RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 DRP2Q13474 957 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 SNTB1Q13884 538 aaKnown RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 SEPT6Q14141 434 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 LY6DQ14210 128 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 MTF1Q14872 753 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 ODF1Q14990 250 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 FASTKD3Q14CZ7 662 aaKnown RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 NOMO1Q15155 1222 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 PRR4Q16378 134 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 CALCRLQ16602 461 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 ISXQ2M1V0 245 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 KLK9Q2XQG4 91 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 KRTAP20-1Q3LI63 56 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 ZNF528Q3MIS6 628 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 ABCA11PQ4W5N1 156 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 FNDC3BQ53EP0 1204 aaKnown RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 KRTCAP3Q53RY4 240 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 RNASE12Q5GAN4 147 aaKnown RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 SIRPB2Q5JXA9 342 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 TREML2Q5T2D2 321 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 YOD1Q5VVQ6 348 aaPredicted RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 RAET1GQ6H3X3 334 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 CC2D1AQ6P1N0 951 aaPredicted RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 MTHFD1LQ6UB35 978 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 VSTM1Q6UX27 236 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 UNQ9370/PRO34162Q6UXP9 181 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 RBMS3Q6XE24 437 aaKnown RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 DCDC5Q6ZRR9 648 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 Q6ZSR9 355 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 DENND5BQ6ZUT9 1274 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 G2E3Q7L622 706 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 OTOP3Q7RTS5 596 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 ZNF367Q7RTV3 350 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 TIPARPQ7Z3E1 657 aaKnown RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 PXKQ7Z7A4 578 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 DDX53Q86TM3 631 aaKnown RBP-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 VSIG1Q86XK7 387 aa-0.99□□□□□ -2.57
CDKL5-210ENST00000636046 HERC6Q8IVU3 1022 aa-0.99□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms