RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 DNAJC16Q9Y2G8 782 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 RLFQ13129 1914 aa2.72□□□□□ -1.97
SMARCB1-208ENST00000634926 MYO5AQ9Y4I1 1855 aaKnown RBP2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 A0A087X0M5 115 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 LOC105369274A0A096LPK9 316 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 LOC102723532A0A0G2JNH3 316 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 A0A1B0GX30 115 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 A1L4Q6 167 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 VWA3AA6NCI4 1184 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 SLC38A8A6NNN8 435 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 PRSS44E7EML9 344 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 PSMD9O00233 223 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 SLC16A3O15427 465 aaKnown RBP2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 SEPT4O43236 478 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 JTBO76095 146 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 TBX18O95935 607 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 CYP21A2P08686 494 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 TMEM225BP0DP42 221 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 ZFXP17010 805 aaPredicted RBP2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 DRD1P21728 446 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 MMP8P22894 467 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 GSTM5P46439 218 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 NXPH1P58417 271 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 CALD1Q05682 793 aaKnown RBP2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 ITIH3Q06033 890 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 SEMA3BQ13214 749 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 WDR43Q15061 677 aaKnown RBP eCLIP2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 TRIP6Q15654 476 aaKnown RBP2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 BAK1Q16611 211 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 AAK1Q2M2I8 961 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 P3H1Q32P28 736 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 TWISTNBQ3B726 338 aaPredicted RBP2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 AASDHQ4L235 1098 aaPredicted RBP2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 L1TD1Q5T7N2 865 aaKnown RBP2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 TEDDM1Q5T9Z0 273 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 FKBP1CQ5VVH2 108 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 NAA35Q5VZE5 725 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 ATG16L1Q676U5 607 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 ANO7Q6IWH7 933 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 CCDC144NLQ6NUI1 221 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 CEP85Q6P2H3 762 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 C9orf47Q6ZRZ4 202 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 ARMC9Q7Z3E5 817 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 CAND1Q86VP6 1230 aaKnown RBP2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 OR4N4Q8N0Y3 316 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 ANKRD44Q8N8A2 993 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 B3GALNT2Q8NCR0 500 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 CD99L2Q8TCZ2 262 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 SLC2A12Q8TD20 617 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 SLC22A17Q8WUG5 538 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 ST8SIA4Q92187 359 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 CENPIQ92674 756 aaPredicted RBP2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 OPTNQ96CV9 577 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 KTI12Q96EK9 354 aaPredicted RBP2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 MCRS1Q96EZ8 462 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 ERO1AQ96HE7 468 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 REXO5Q96IC2 774 aaKnown RBP2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 C7orf26Q96N11 449 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 MECRQ9BV79 373 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 KRTAP4-3Q9BYR4 195 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 ARHGAP39Q9C0H5 1083 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 ANKRD2Q9GZV1 360 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 PAIP1Q9H074 479 aaKnown RBP2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 GLOD4Q9HC38 313 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 TBC1D22BQ9NU19 505 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 BLOC1S4Q9NUP1 217 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 FBXO28Q9NVF7 368 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 KLHL13Q9P2N7 655 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 BAG5Q9UL15 447 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 TBX20Q9UMR3 447 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 SH2B3Q9UQQ2 575 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 UBE2J1Q9Y385 318 aaPredicted RBP2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 TRIM17Q9Y577 477 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 CFAP54Q96N23 3096 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 TTC3P53804 2025 aa2.71□□□□□ -1.98
SMARCB1-208ENST00000634926 GAKO14976 1311 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 PDS5AQ29RF7 1337 aaKnown RBP2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 DNAH14Q0VDD8 3507 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 CLRN2A0PK11 232 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 FAM90A10PA6NDY2 464 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 MBD3L5A6NJ08 208 aaPredicted RBP2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 CD8B2A6NJW9 211 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 PRSS47A8MTI9 375 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 BTBD19C9JJ37 291 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 STX16-NPEPL1H3BU86 382 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 GRM8O00222 908 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 STX16O14662 325 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 ADAM10O14672 748 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 NKX2-8O15522 239 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 HNRNPRO43390 633 aaKnown RBP2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 TLR2O60603 784 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 PMPCBO75439 489 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 TMEM63AO94886 807 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 VNN1O95497 513 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 PDHA1P08559 390 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 HNRNPA1P09651 372 aaKnown RBP eCLIP2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 PRF1P14222 555 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 MT3P25713 68 aa2.7□□□□□ -1.98
SMARCB1-208ENST00000634926 GKP32189 559 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms