RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 LIPMQ5VYY2 423 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 RWDD4Q6NW29 188 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 PKN3Q6P5Z2 889 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 MFSD6LQ8IWD5 586 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 PELI3Q8N2H9 469 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 EFCAB3Q8N7B9 438 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 C2CD4AQ8NCU7 369 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 ACVR1CQ8NER5 493 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 MAPK15Q8TD08 544 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 VPS39Q96JC1 886 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 ZFP42Q96MM3 310 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 UROC1Q96N76 676 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 PGLYRP2Q96PD5 576 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 KCNK16Q96T55 309 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 EPAS1Q99814 870 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 TSEN34Q9BSV6 310 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 UNKQ9C0B0 810 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 SIK2Q9H0K1 926 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 COG4Q9H9E3 785 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 OR12D3Q9UGF7 316 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 CDH22Q9UJ99 828 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 PRPF19Q9UMS4 504 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 AAR2Q9Y312 384 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 TIMM13Q9Y5L4 95 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 WASF2Q9Y6W5 498 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 A0A096LPK6 155 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 MEIS3P2A8K0S8 358 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 SLCO1B7G3V0H7 640 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 MATN3O15232 486 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 NPHS1O60500 1241 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 THP07101 528 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 PCSK1P29120 753 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 GMPRP36959 345 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 IRF9Q00978 393 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 SATB1Q01826 763 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 MPP3Q13368 585 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 PCID2Q5JVF3 399 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 IRAK1BP1Q5VVH5 260 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 MSANTD2Q6P1R3 559 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 CHSY3Q70JA7 882 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 CMC1Q7Z7K0 106 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 PDSS2Q86YH6 399 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 ZNF781Q8N8C0 355 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 AZIN2Q96A70 460 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 MFSD3Q96ES6 412 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 NMRAL1Q9HBL8 299 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 ZNF358Q9NW07 568 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 DSEQ9UL01 958 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 SARDHQ9UL12 918 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 PAPSS2O95340 614 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 CLTBP09497 229 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 USP17L7P0C7H9 530 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 CSF2RAP15509 400 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 TPH1P17752 444 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 TYMPP19971 482 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 NMBRP28336 390 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 CA8P35219 290 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 RAB27AP51159 221 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 AP2B1P63010 937 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 TIGD5Q53EQ6 642 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 CERCAMQ5T4B2 595 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 KIAA0930Q6ICG6 404 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 POTEHQ6S545 545 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 RANBP10Q6VN20 620 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 TICAM1Q8IUC6 712 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 SDR16C5Q8N3Y7 309 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 DQX1Q8TE96 717 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 LRGUKQ96M69 825 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 OXCT2Q9BYC2 517 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 SCOCQ9UIL1 159 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 PACSIN3Q9UKS6 424 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 SQORQ9Y6N5 450 aa7.25□□□□□ -1.25
CTNNA1-244ENST00000627109 IGLV3-10A0A075B6K4 115 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 FAM92AA1XBS5 289 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 DPPA5A6NC42 116 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 TADA2AO75478 443 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 ZMPSTE24O75844 475 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 PDE5AO76074 875 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 ZCCHC18P0CG32 403 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 SRGAP2BP0DMP2 458 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 SP100P23497 879 aaPredicted RBP7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 TUBP50607 506 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 POLE2P56282 527 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 SLC25A3Q00325 362 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 KLF10Q13118 480 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 CUL3Q13618 768 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 ITGA9Q13797 1035 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 EML3Q32P44 896 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 SLC9B1Q4ZJI4 515 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 SPOUT1Q5T280 376 aaKnown RBP7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 C8orf82Q6P1X6 216 aaPredicted RBP7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 KDELC1Q6UW63 502 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 KIAA0408Q6ZU52 694 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 FRMD7Q6ZUT3 714 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 FBXW8Q8N3Y1 598 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 TEX26Q8N6G2 289 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 SHKBP1Q8TBC3 707 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 MYLPFQ96A32 169 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 VMP1Q96GC9 406 aa7.24□□□□□ -1.25
CTNNA1-244ENST00000627109 SLC39A13Q96H72 371 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms