RNA–Protein interactions for RNA: ENST00000625916.1

SCN1A-208, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 560 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-208ENST00000625916 ACTL6BO94805 426 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 TFPIP10646 304 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 FGF5P12034 268 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 ACP5P13686 325 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 ARSAP15289 507 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 CTPS1P17812 591 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 MARK3P27448 753 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 TIMP3P35625 211 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 HSD17B4P51659 736 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 ZNF155Q12901 538 aaPredicted RBP2.95□□□□□ -1.94
SCN1A-208ENST00000625916 SLC1A5Q15758 541 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 AP5B1Q2VPB7 878 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 TTC22Q5TAA0 569 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 IRAK1BP1Q5VVH5 260 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 SHFQ7M4L6 423 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 SLC9B2Q86UD5 537 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 MON1AQ86VX9 555 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 ZC3HC1Q86WB0 502 aaKnown RBP2.95□□□□□ -1.94
SCN1A-208ENST00000625916 SLC44A2Q8IWA5 706 aaPredicted RBP2.95□□□□□ -1.94
SCN1A-208ENST00000625916 LNX1Q8TBB1 728 aaPredicted RBP2.95□□□□□ -1.94
SCN1A-208ENST00000625916 ARRDC2Q8TBH0 407 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 TAS1R2Q8TE23 839 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 CREB3L4Q8TEY5 395 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 TMEM19Q96HH6 336 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 ABCF3Q9NUQ8 709 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 TMLHEQ9NVH6 421 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 SLC9A2Q9UBY0 812 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 KCNS2Q9ULS6 477 aa2.95□□□□□ -1.94
SCN1A-208ENST00000625916 CGNL1Q0VF96 1302 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 CPED1A4D0V7 1026 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 HSPA12AO43301 675 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 PRSS1P07477 247 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 CYP21A2P08686 494 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 TECP42680 631 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 AK2P54819 239 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 HDAC4P56524 1084 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 LINC01547P58512 204 aaPredicted RBP2.94□□□□□ -1.94
SCN1A-208ENST00000625916 AP2B1P63010 937 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 PDCLQ13371 301 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 BYSLQ13895 437 aaKnown RBP2.94□□□□□ -1.94
SCN1A-208ENST00000625916 PTK2BQ14289 1009 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 IL13RA2Q14627 380 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 ME3Q16798 604 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 TMEM30BQ3MIR4 351 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 GGT6Q6P531 493 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 KLHL17Q6TDP4 642 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 KRTAP7-1Q8IUC3 87 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 CCDC117Q8IWD4 279 aaPredicted RBP2.94□□□□□ -1.94
SCN1A-208ENST00000625916 FSIP1Q8NA03 581 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 SCAMP5Q8TAC9 235 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 ZNF501Q96CX3 271 aaPredicted RBP2.94□□□□□ -1.94
SCN1A-208ENST00000625916 YME1L1Q96TA2 773 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 KATNAL1Q9BW62 490 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 NOX4Q9NPH5 578 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 OBP2BQ9NPH6 170 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 TAAR2Q9P1P5 351 aa2.94□□□□□ -1.94
SCN1A-208ENST00000625916 TP53BP1Q12888 1972 aaPredicted RBP2.94□□□□□ -1.94
SCN1A-208ENST00000625916 ANO9A1A5B4 782 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 GOLGA6L3A6NEY3 463 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 EXTL3O43909 919 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 HBP1O60381 514 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 ALDH4A1P30038 563 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 GJC1P36383 396 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 PTPN9P43378 593 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 MTNR1AP48039 350 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 FMO5P49326 533 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 NR0B1P51843 470 aaKnown RBP2.93□□□□□ -1.94
SCN1A-208ENST00000625916 ARHGAP8P85298 464 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 SLC18A2Q05940 514 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 SREBF2Q12772 1141 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 OASLQ15646 514 aaKnown RBP2.93□□□□□ -1.94
SCN1A-208ENST00000625916 CCDC181Q5TID7 509 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 NAPEPLDQ6IQ20 393 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 FAM122CQ6P4D5 195 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 ARHGAP11AQ6P4F7 1023 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 SATL1Q86VE3 508 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 SFTPA2Q8IWL1 248 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 GHDCQ8N2G8 530 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 METTL27Q8N6F8 245 aaPredicted RBP2.93□□□□□ -1.94
SCN1A-208ENST00000625916 NCSTNQ92542 709 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 OTULINQ96BN8 352 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 TMEM41AQ96HV5 264 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 TTC14Q96N46 770 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 MYD88Q99836 296 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 PRDM8Q9NQV8 689 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 ATP8A2Q9NTI2 1148 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 ANKRD10Q9NXR5 420 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 KCND3Q9UK17 655 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 POU2F3Q9UKI9 436 aa2.93□□□□□ -1.94
SCN1A-208ENST00000625916 A0A1W2PS18 150 aa2.92□□□□□ -1.94
SCN1A-208ENST00000625916 LGALS16A8MUM7 142 aa2.92□□□□□ -1.94
SCN1A-208ENST00000625916 ZNF587BE7ETH6 402 aa2.92□□□□□ -1.94
SCN1A-208ENST00000625916 CAPN9O14815 690 aa2.92□□□□□ -1.94
SCN1A-208ENST00000625916 FFAR2O15552 330 aa2.92□□□□□ -1.94
SCN1A-208ENST00000625916 ZIC3O60481 467 aa2.92□□□□□ -1.94
SCN1A-208ENST00000625916 METTL18O95568 372 aa2.92□□□□□ -1.94
SCN1A-208ENST00000625916 NBPF7P0C2Y1 421 aaPredicted RBP2.92□□□□□ -1.94
SCN1A-208ENST00000625916 KRT2P35908 639 aa2.92□□□□□ -1.94
SCN1A-208ENST00000625916 PIGAP37287 484 aa2.92□□□□□ -1.94
SCN1A-208ENST00000625916 NOVP48745 357 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms