RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 IDH3AP50213 366 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 CA9Q16790 459 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 LDLRAP1Q5SW96 308 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 NOTUMQ6P988 496 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 C3orf67Q6ZVT6 689 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 ANKS1BQ7Z6G8 1248 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 UNKQ9C0B0 810 aaKnown RBP8.98□□□□□ -0.97
VCL-206ENST00000623461 SCUBE2Q9NQ36 999 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 IGSF9Q9P2J2 1179 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 GNG14A0A1W2PPG7 69 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 GSAPA4D1B5 854 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 BCKDKO14874 412 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 PLOD3O60568 738 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 NOL4O94818 638 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 ERBB2P04626 1255 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 UGT2B4P06133 528 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 SUPT20HL2P0C7V6 817 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 TPSB2P20231 275 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 TPSAB1Q15661 275 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 HYIQ5T013 277 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 TRPV1Q8NER1 839 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 ZNF420Q8TAQ5 688 aaPredicted RBP8.98□□□□□ -0.97
VCL-206ENST00000623461 NKD2Q969F2 451 aaPredicted RBP8.98□□□□□ -0.97
VCL-206ENST00000623461 HSPBAP1Q96EW2 488 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 TSPAN18Q96SJ8 248 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 KAT8Q9H7Z6 458 aaKnown RBP8.98□□□□□ -0.97
VCL-206ENST00000623461 SPATA31A3Q5VYP0 1347 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 ZNF99A8MXY4 864 aaPredicted RBP8.97□□□□□ -0.97
VCL-206ENST00000623461 FADS2O95864 444 aaKnown RBP8.97□□□□□ -0.97
VCL-206ENST00000623461 RENBPP51606 427 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 OR2B6P58173 313 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 MTA1Q13330 715 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 PLCL1Q15111 1095 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 SH3D19Q5HYK7 790 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 FGD3Q5JSP0 725 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 LIN54Q6MZP7 749 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 ZCCHC8Q6NZY4 707 aaKnown RBP8.97□□□□□ -0.97
VCL-206ENST00000623461 GPSM1Q86YR5 675 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 ARMC8Q8IUR7 673 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 TOP1MTQ969P6 601 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 SLC7A8Q9UHI5 535 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 TSPAN16Q9UKR8 245 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 STXBP5LQ9Y2K9 1186 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 GAKO14976 1311 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 CYP3A7-CYP3A51PA0A087WV96 503 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 NTSR2O95665 410 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 SERPIND1P05546 499 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 CYP3A7P24462 503 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 MTHFRP42898 656 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 LSAMPQ13449 338 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 NEPROQ6NW34 567 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 UBE2Q1Q7Z7E8 422 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 NKAPQ8N5F7 415 aaKnown RBP8.97□□□□□ -0.97
VCL-206ENST00000623461 ZNF671Q8TAW3 534 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 EGFL7Q9UHF1 273 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 CHD4Q14839 1912 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 A0A0J9YYE9 177 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 CYBBP04839 570 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 CYP3A4P08684 503 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 TXNP10599 105 aaKnown RBP8.97□□□□□ -0.97
VCL-206ENST00000623461 HGFP14210 728 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 CPB1P15086 417 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 ORC1Q13415 861 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 VEPH1Q14D04 833 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 C15orf59Q2T9L4 293 aaPredicted RBP8.97□□□□□ -0.97
VCL-206ENST00000623461 STRIP1Q5VSL9 837 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 REP15Q6BDI9 236 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 CRISPLD1Q9H336 500 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 KCNMB3Q9NPA1 279 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 ZSCAN32Q9NX65 697 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 SAMD4AQ9UPU9 718 aaKnown RBP8.97□□□□□ -0.97
VCL-206ENST00000623461 LTFP02788 710 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 SLC7A1P30825 629 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 PLK1P53350 603 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 JAM2P57087 298 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 TMEM94Q12767 1356 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 ZNF423Q2M1K9 1284 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 ZDHHC24Q6UX98 284 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 GK5Q6ZS86 529 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 SPPL2CQ8IUH8 684 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 PEX5LQ8IYB4 626 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 PLEKHO2Q8TD55 490 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 EEF1AKMT1Q8WVE0 214 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 MAGEB10Q96LZ2 347 aaPredicted RBP8.97□□□□□ -0.97
VCL-206ENST00000623461 VPS35Q96QK1 796 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 KIFC1Q9BW19 673 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 GPN1Q9HCN4 374 aaPredicted RBP8.97□□□□□ -0.97
VCL-206ENST00000623461 PRDM8Q9NQV8 689 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 IL17RBQ9NRM6 502 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 DYRK1BQ9Y463 629 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 PAPSS1O43252 624 aaPredicted RBP8.97□□□□□ -0.97
VCL-206ENST00000623461 CLTBP09497 229 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 ATF6P18850 670 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 GPC1P35052 558 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 HALP42357 657 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 NOMO3P69849 1222 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 DRICH1Q6PGQ1 229 aaPredicted RBP8.97□□□□□ -0.97
VCL-206ENST00000623461 GLIS3Q8NEA6 775 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 TAAR1Q96RJ0 339 aa8.97□□□□□ -0.97
VCL-206ENST00000623461 CRAMP1Q96RY5 1269 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms