RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 SNRNP25Q9BV90 132 aaKnown RBP9.87□□□□□ -0.83
CLTCL1-211ENST00000621271 GOLGA2P5Q9HBQ8 144 aa9.87□□□□□ -0.83
CLTCL1-211ENST00000621271 VTI1BQ9UEU0 232 aa9.87□□□□□ -0.83
CLTCL1-211ENST00000621271 TMCO1Q9UM00 188 aa9.87□□□□□ -0.83
CLTCL1-211ENST00000621271 ARVCFO00192 962 aa9.87□□□□□ -0.83
CLTCL1-211ENST00000621271 TULP2O00295 520 aa9.87□□□□□ -0.83
CLTCL1-211ENST00000621271 UGT2B4P06133 528 aa9.87□□□□□ -0.83
CLTCL1-211ENST00000621271 TKTP29401 623 aaKnown RBP9.87□□□□□ -0.83
CLTCL1-211ENST00000621271 C1DQ13901 141 aaKnown RBP9.87□□□□□ -0.83
CLTCL1-211ENST00000621271 TMEM164Q5U3C3 297 aa9.87□□□□□ -0.83
CLTCL1-211ENST00000621271 FAM45BPQ6NSW5 357 aa9.87□□□□□ -0.83
CLTCL1-211ENST00000621271 CASP12Q6UXS9 341 aa9.87□□□□□ -0.83
CLTCL1-211ENST00000621271 CFAP52Q8N1V2 620 aa9.87□□□□□ -0.83
CLTCL1-211ENST00000621271 FAM45AQ8TCE6 357 aa9.87□□□□□ -0.83
CLTCL1-211ENST00000621271 FIG4Q92562 907 aa9.87□□□□□ -0.83
CLTCL1-211ENST00000621271 HBS1LQ9Y450 684 aaKnown RBP9.87□□□□□ -0.83
CLTCL1-211ENST00000621271 IRS2Q9Y4H2 1338 aa9.87□□□□□ -0.83
CLTCL1-211ENST00000621271 DLG4P78352 724 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 PTPRNQ16849 979 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 DNAJC14Q6Y2X3 702 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 PGM2Q96G03 612 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 SEMA4AQ9H3S1 761 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 PIF1Q9H611 641 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 TMPRSS4Q9NRS4 437 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 ENOPH1Q9UHY7 261 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 MRTO4Q9UKD2 239 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 RIPK3Q9Y572 518 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 ZCCHC18P0CG32 403 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 RPL3P39023 403 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 DGKGP49619 791 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 RAD23AP54725 363 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 ZNF280AP59817 542 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 ELF3P78545 371 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 CDK16Q00536 496 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 CAP1Q01518 475 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 TRIM32Q13049 653 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 SPDYCQ5MJ68 293 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 PHC3Q8NDX5 983 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 OR5B17Q8NGF7 314 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 TPD52L3Q96J77 140 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 POLR1BQ9H9Y6 1135 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 SLC12A4Q9UP95 1085 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 NDUFAF1Q9Y375 327 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 COLEC10Q9Y6Z7 277 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 NALCNQ8IZF0 1738 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 CCDC154A6NI56 674 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 EPN2O95208 641 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 ALAS2P22557 587 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 AKT2P31751 481 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 BLKP51451 505 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 PLK1P53350 603 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 FSTL1Q12841 308 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 ITGB3BPQ13352 177 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 ATP13A4Q4VNC1 1196 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 XKR6Q5GH73 641 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 RAVER1Q8IY67 606 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 RBFAQ8N0V3 343 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 OR52K1Q8NGK4 314 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 UTP15Q8TED0 518 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 MRPL45Q9BRJ2 306 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 SEMA4BQ9NPR2 832 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 RABGEF1Q9UJ41 708 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 PCDHA11Q9Y5I1 949 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 NRXN3Q9Y4C0 1643 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 ABHD14A-ACY1A0A1B0GW23 586 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 PAGE1O75459 146 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 ERBB2P04626 1255 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 FGF1P05230 155 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 MAXP61244 160 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 MSLNQ13421 630 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 UGCGQ16739 394 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 FAM228AQ86W67 206 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 SCUBE1Q8IWY4 988 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 C12orf29Q8N999 325 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 HAS1Q92839 578 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 TCF7L2Q9NQB0 619 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 KLF15Q9UIH9 416 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 GMEB2Q9UKD1 530 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 H3BN98 237 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 RIPK2O43353 540 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 CNOT3O75175 753 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 ERAL1O75616 437 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 STBD1O95210 358 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 SERPINE1P05121 402 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 PSMD7P51665 324 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 AIF1P55008 147 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 SF1Q15637 639 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 SLC44A4Q53GD3 710 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 INTS6LQ5JSJ4 861 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 PPP1R26Q5T8A7 1209 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 TYW3Q6IPR3 259 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 FAM151BQ6UXP7 276 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 KATNAL2Q8IYT4 538 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 PRCCQ92733 491 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 USP6NLQ92738 828 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 LRRC39Q96DD0 335 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 POMKQ9H5K3 350 aa9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 DDX28Q9NUL7 540 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-211ENST00000621271 LRCH1Q9Y2L9 728 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms