RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 EFEMP2O95967 443 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 SERPINF2P08697 491 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 EN2P19622 333 aaPredicted RBP10.03□□□□□ -0.8
VTA1-205ENST00000620996 ADRA1AP35348 466 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 SLC1A2P43004 574 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 SCTRP47872 440 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 FPGSQ05932 587 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 BST1Q10588 318 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 CBLBQ13191 982 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 PTPRCAPQ14761 206 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 STXBP5Q5T5C0 1151 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 SNX30Q5VWJ9 437 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 ATG16L1Q676U5 607 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 RANBP10Q6VN20 620 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 SPATA6LQ8N4H0 392 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 ERP27Q96DN0 273 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 TMA16Q96EY4 203 aaKnown RBP10.03□□□□□ -0.8
VTA1-205ENST00000620996 NDNQ99608 321 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 KLF16Q9BXK1 252 aaPredicted RBP10.03□□□□□ -0.8
VTA1-205ENST00000620996 MAGEH1Q9H213 219 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 SUDS3Q9H7L9 328 aaPredicted RBP10.03□□□□□ -0.8
VTA1-205ENST00000620996 SCUBE2Q9NQ36 999 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 LMCD1Q9NZU5 365 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 TMEM216Q9P0N5 145 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 CFAP97Q9P2B7 532 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 SEPT3Q9UH03 358 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 CHKBQ9Y259 395 aa10.03□□□□□ -0.8
VTA1-205ENST00000620996 A0A1B0GVM2 712 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 LCHNA4D1U4 455 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 TCAF2A6NFQ2 919 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 OR51F1A6NGY5 319 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 BAIAP3O94812 1187 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 OAS1P00973 400 aaKnown RBP10.02□□□□□ -0.8
VTA1-205ENST00000620996 ADH1AP07327 375 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 CDK18Q07002 472 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 STX3Q13277 289 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 MTA1Q13330 715 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 ACCSLQ4AC99 568 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 ACBD5Q5T8D3 534 aaPredicted RBP10.02□□□□□ -0.8
VTA1-205ENST00000620996 ZNF449Q6P9G9 518 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 CCDC117Q8IWD4 279 aaPredicted RBP10.02□□□□□ -0.8
VTA1-205ENST00000620996 TRIM42Q8IWZ5 723 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 EFHBQ8N7U6 833 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 KREMEN2Q8NCW0 462 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 MYRFLQ96LU7 910 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 TASP1Q9H6P5 420 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 ACSS2Q9NR19 701 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 VPS45Q9NRW7 570 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 HAUS2Q9NVX0 235 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 ZNF212Q9UDV6 495 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 DCDC2Q9UHG0 476 aa10.02□□□□□ -0.8
VTA1-205ENST00000620996 MMP2P08253 660 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 PPIGQ13427 754 aaKnown RBP eCLIP10.02□□□□□ -0.81
VTA1-205ENST00000620996 PABPC1LQ4VXU2 614 aaKnown RBP10.02□□□□□ -0.81
VTA1-205ENST00000620996 TAF1BQ53T94 588 aaPredicted RBP10.02□□□□□ -0.81
VTA1-205ENST00000620996 NEPROQ6NW34 567 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 ARID3BQ8IVW6 561 aaPredicted RBP10.02□□□□□ -0.81
VTA1-205ENST00000620996 SPNS2Q8IVW8 549 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 FITM2Q8N6M3 262 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 FAM136AQ96C01 138 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 TRMT2BQ96GJ1 504 aaKnown RBP10.02□□□□□ -0.81
VTA1-205ENST00000620996 ZBP1Q9H171 429 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 NOD2Q9HC29 1040 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 ARL5AQ9Y689 179 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 USH1CQ9Y6N9 552 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 LYPLA1O75608 230 aaPredicted RBP10.02□□□□□ -0.81
VTA1-205ENST00000620996 AHSGP02765 367 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 C2P06681 752 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 BPGMP07738 259 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 CTSAP10619 480 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 HOXD9P28356 352 aaPredicted RBP10.02□□□□□ -0.81
VTA1-205ENST00000620996 MZF1P28698 734 aaPredicted RBP10.02□□□□□ -0.81
VTA1-205ENST00000620996 ARFIP2P53365 341 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 FSCBQ5H9T9 825 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 ZNF697Q5TEC3 545 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 KLHDC10Q6PID8 442 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 TIFABQ6ZNK6 161 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 YTHDF3Q7Z739 585 aaKnown RBP10.02□□□□□ -0.81
VTA1-205ENST00000620996 TMEM150AQ86TG1 271 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 C10orf107Q8IVU9 208 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 MFN1Q8IWA4 741 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 PLD6Q8N2A8 252 aaKnown RBP10.02□□□□□ -0.81
VTA1-205ENST00000620996 RYBPQ8N488 228 aaPredicted RBP10.02□□□□□ -0.81
VTA1-205ENST00000620996 LPCAT1Q8NF37 534 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 OR6K2Q8NGY2 324 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 ARRDC2Q8TBH0 407 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 AGR3Q8TD06 166 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 ACMSDQ8TDX5 336 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 HDAC10Q969S8 669 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 CEP295NLQ96MC4 621 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 LRRC37BQ96QE4 947 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 ECT2Q9H8V3 914 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 HCFC1R1Q9NWW0 138 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 NSMCE4AQ9NXX6 385 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 INSL6Q9Y581 213 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 PCDHGC4Q9Y5F7 938 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 SLC4A7Q9Y6M7 1214 aa10.02□□□□□ -0.81
VTA1-205ENST00000620996 COL4A4P53420 1690 aaPredicted RBP10.01□□□□□ -0.81
VTA1-205ENST00000620996 FAM95CA0A1B0GW59 222 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 HIDE1A8MVS5 230 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms