RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 UBA2Q9UBT2 640 aaPredicted RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 TAGLN3Q9UI15 199 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 ZNF112Q9UJU3 913 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 RPL26L1Q9UNX3 145 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 ZBTB42B2RXF5 422 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 NEDD8-MDP1E9PL57 170 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 LIN7AO14910 233 aaPredicted RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 RFPL1O75677 317 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 MSH3P20585 1137 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 NUDT2P50583 147 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 SLC25A3Q00325 362 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 N4BP2L1Q5TBK1 243 aaPredicted RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 CHMP1BQ7LBR1 199 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 LINC00523Q86TU6 105 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 SIX5Q8N196 739 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 MYO1HQ8N1T3 1032 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 ZNF366Q8N895 744 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 CLEC4CQ8WTT0 213 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 PAWRQ96IZ0 340 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 EBNA1BP2Q99848 306 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 ELOVL6Q9H5J4 265 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 PACSIN3Q9UKS6 424 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 MKL2Q9ULH7 1088 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 IFRD1O00458 451 aaPredicted RBP8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 PER2O15055 1255 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 RPLP2P05387 115 aaKnown RBP8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 ATP5BP06576 529 aaKnown RBP8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 ADH1AP07327 375 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 GSTM1P09488 218 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 MAT2AP31153 395 aaKnown RBP8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 CAPZA2P47755 286 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 CLCNKBP51801 687 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 HPCAP84074 193 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 ALDH6A1Q02252 535 aaKnown RBP8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 TRIP10Q15642 601 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 USP41Q3LFD5 358 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 SETMARQ53H47 684 aaPredicted RBP8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 RNF220Q5VTB9 566 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 IZUMO2Q6UXV1 221 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 HERC6Q8IVU3 1022 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 KLK6Q92876 244 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 NDNQ99608 321 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 C20orf27Q9GZN8 174 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 VPS45Q9NRW7 570 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 CHCHD3Q9NX63 227 aaKnown RBP8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 ZNHIT2Q9UHR6 403 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 PHIPQ8WWQ0 1821 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 CITO14578 2027 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 TBC1D3DA0A087WVF3 549 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 TBC1D3IA0A087WXS9 549 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 TBC1D3EA0A087X179 549 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 TBC1D3KA0A087X1G2 549 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 TBC1D3FA6NER0 549 aaPredicted RBP8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 TBC1D3LB9A6J9 549 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 HCRTO43612 131 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 F7P08709 466 aaPredicted RBP8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 TBC1D3HP0C7X1 549 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 HPGDP15428 266 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 PROZP22891 400 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 IL4RP24394 825 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 PSMB4P28070 264 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 AP2B1P63010 937 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 TOMM20Q15388 145 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 AGAP9Q5VTM2 703 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 TBC1D3GQ6DHY5 549 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 TBC1D3CQ6IPX1 549 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 CIR1Q86X95 450 aaPredicted RBP8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 ULK2Q8IYT8 1036 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 TBC1D3Q8IZP1 549 aaPredicted RBP8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 WNT8BQ93098 351 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 FRMD8Q9BZ67 464 aaPredicted RBP8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 ROGDIQ9GZN7 287 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 SPG21Q9NZD8 308 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 CNTN3Q9P232 1028 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 PADI4Q9UM07 663 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 HBS1LQ9Y450 684 aaKnown RBP8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 CABIN1Q9Y6J0 2220 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 BDP1A6H8Y1 2624 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 hCG_2014768A0A024R1R8 64 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 FGBP02675 491 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 BPGMP07738 259 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 MMP3P08254 477 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 ERCC2P18074 760 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 GMPRP36959 345 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 HIST2H2ACQ16777 129 aaPredicted RBP8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 C2orf27AQ580R0 203 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 HIST2H2AA3Q6FI13 130 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 LCLAT1Q6UWP7 414 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 EFCAB3Q8N7B9 438 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 DCBLD1Q8N8Z6 715 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 RIN3Q8TB24 985 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 DIS3LQ8TF46 1054 aaKnown RBP8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 EME1Q96AY2 570 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 CEP19Q96LK0 163 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 C7orf26Q96N11 449 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 CYP2S1Q96SQ9 504 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 KCNK16Q96T55 309 aa8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 ZNF184Q99676 751 aaPredicted RBP8.35□□□□□ -1.07
PTPDC1-204ENST00000620992 MFHAS1Q9Y4C4 1052 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms