RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 NOL3O60936 208 aaKnown RBP9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 CSPG5O95196 566 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 AHSGP02765 367 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 RHOQP17081 205 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 AOC1P19801 751 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 TYMPP19971 482 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 IL10P22301 178 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 GMPRP36959 345 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 TAF10Q12962 218 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 CRHR2Q13324 411 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 IFNL1Q8IU54 200 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 OR52K2Q8NGK3 314 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 ARNTL2Q8WYA1 636 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 ZNF333Q96JL9 665 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 RTKNQ9BST9 563 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 FTHL17Q9BXU8 183 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 ATP13A1Q9HD20 1204 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 SCUBE2Q9NQ36 999 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 OXSMQ9NWU1 459 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 TRMT6Q9UJA5 497 aaKnown RBP9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 COL11A1P12107 1806 aaPredicted RBP9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 C9IYK1 514 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 H0Y626 953 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 ADCY6O43306 1168 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 TLR5O60602 858 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 VPS26AO75436 327 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 GABBR2O75899 941 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 IL1BP01584 269 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 TSPAN8P19075 237 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 AFF1P51825 1210 aaKnown RBP9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 GJA9P57773 515 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 ACTR3P61158 418 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 ZNF534Q76KX8 674 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 APLFQ8IW19 511 aaPredicted RBP9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 FBXW8Q8N3Y1 598 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 PCDH20Q8N6Y1 951 aaKnown RBP9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 OR6Y1Q8NGX8 325 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 ZNF570Q96NI8 536 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 KCNK13Q9HB14 408 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 MID1IP1Q9NPA3 183 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 TAS2R13Q9NYV9 303 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 TRPM5Q9NZQ8 1165 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 SEPT3Q9UH03 358 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 PCDHB8Q9UN66 801 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 FAM50BQ9Y247 325 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 PKP3Q9Y446 797 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 CITO14578 2027 aa9.29□□□□□ -0.92
RBFOX1-223ENST00000620507 PSMD12O00232 456 aaPredicted RBP9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 HLA-DQB2P05538 268 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 HOXB8P17481 243 aaPredicted RBP9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 ATP5C1P36542 298 aaKnown RBP9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 SLC1A2P43004 574 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 POLD2P49005 469 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 DSC2Q02487 901 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 BFSP2Q13515 415 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 CYTH1Q15438 398 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 LSM12Q3MHD2 195 aaKnown RBP9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 SLC9B1Q4ZJI4 515 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 ARHGAP36Q6ZRI8 547 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 KIAA0408Q6ZU52 694 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 PAQR9Q6ZVX9 377 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 SEPT8Q92599 483 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 ULK4Q96C45 1275 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 SDCCAG3Q96C92 435 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 ASIC4Q96FT7 647 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 SUSD3Q96L08 255 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 WDR6Q9NNW5 1121 aaKnown RBP9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 GID8Q9NWU2 228 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 ATP6AP2A0A1C7CYW4 349 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 CCL22O00626 93 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 HOXA2O43364 376 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 ATP6AP2O75787 350 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 MSX2P35548 267 aaPredicted RBP9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 SOX11P35716 441 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 MLLT6P55198 1093 aaPredicted RBP9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 MTA1Q13330 715 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 BLMHQ13867 455 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 PFKFB4Q16877 469 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 MORN1Q5T089 497 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 PTRHD1Q6GMV3 140 aaKnown RBP9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 SLC30A9Q6PML9 568 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 LDB1Q86U70 411 aaPredicted RBP9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 LPCAT1Q8NF37 534 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 HMCESQ96FZ2 354 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 ZBTB18Q99592 522 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 GPR22Q99680 433 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 ECSITQ9BQ95 431 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 MLPHQ9BV36 600 aaPredicted RBP9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 S100A14Q9HCY8 104 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 THEGQ9P2T0 379 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 UBA2Q9UBT2 640 aaPredicted RBP9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 MYADML2A6NDP7 307 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 TBKBP1A7MCY6 615 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 SYCE1LA8MT33 242 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 SNNO75324 88 aaPredicted RBP9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 ZNF33AQ06730 810 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 IRF5Q13568 498 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 INPP5AQ14642 412 aa9.28□□□□□ -0.92
RBFOX1-223ENST00000620507 TMCO4Q5TGY1 634 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms