RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 GRSF1Q12849 480 aaKnown RBP eCLIP7.76□□□□□ -1.17
CBWD1-228ENST00000619157 DRAP1Q14919 205 aaPredicted RBP7.76□□□□□ -1.17
CBWD1-228ENST00000619157 TAF5Q15542 800 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 STX1AQ16623 288 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 MEA1Q16626 185 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 EMC4Q5J8M3 183 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 KLHDC7AQ5VTJ3 777 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 MSANTD2Q6P1R3 559 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 TOGARAM2Q6ZUX3 1019 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 ENOSF1Q7L5Y1 443 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 TMEM110Q86TL2 294 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 PASD1Q8IV76 773 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 FMNL3Q8IVF7 1028 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 FAM114A1Q8IWE2 563 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 DHX40Q8IX18 779 aaKnown RBP7.76□□□□□ -1.17
CBWD1-228ENST00000619157 FAM217AQ8IXS0 508 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 SYNPOQ8N3V7 929 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 RPLP0P6Q8NHW5 317 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 OTUB2Q96DC9 234 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 HSFY1Q96LI6 401 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 LMF1Q96S06 567 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 CPXM1Q96SM3 734 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 IER2Q9BTL4 223 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 LSM14BQ9BX40 385 aaKnown RBP7.76□□□□□ -1.17
CBWD1-228ENST00000619157 NACA2Q9H009 215 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 MIS12Q9H081 205 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 PLCB1Q9NQ66 1216 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 CNGB3Q9NQW8 809 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 ANO10Q9NW15 660 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 PLK2Q9NYY3 685 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 TBC1D14Q9P2M4 693 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 LIMA1Q9UHB6 759 aaKnown RBP7.76□□□□□ -1.17
CBWD1-228ENST00000619157 SFMBT1Q9UHJ3 866 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 FBXO10Q9UK96 956 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 SH3BP1Q9Y3L3 701 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 SPTBN4Q9H254 2564 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 SLC12A8A0AV02 714 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 PRRT4C9JH25 899 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 NEDD8-MDP1E9PL57 170 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 CACNG3O60359 315 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 KLHL18O94889 574 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 KAT7O95251 611 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 PENKP01210 267 aaPredicted RBP7.75□□□□□ -1.17
CBWD1-228ENST00000619157 IGLV3-27P01718 113 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 LTFP02788 710 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 ERBB2P04626 1255 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 RALAP11233 206 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 NAT2P11245 290 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 UCHL3P15374 230 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 USP8P40818 1118 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 EIF2DP41214 584 aaKnown RBP7.75□□□□□ -1.17
CBWD1-228ENST00000619157 SGSHP51688 502 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 JAM2P57087 298 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 MYL5Q02045 173 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 GAD2Q05329 585 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 ABHD18Q0P651 414 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 PDCLQ13371 301 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 EIF4EBP2Q13542 120 aaPredicted RBP7.75□□□□□ -1.17
CBWD1-228ENST00000619157 STILQ15468 1287 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 SF1Q15637 639 aaKnown RBP7.75□□□□□ -1.17
CBWD1-228ENST00000619157 PTPN20Q4JDL3 420 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 ANO6Q4KMQ2 910 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 USP39Q53GS9 565 aaKnown RBP7.75□□□□□ -1.17
CBWD1-228ENST00000619157 OTUD1Q5VV17 481 aaPredicted RBP7.75□□□□□ -1.17
CBWD1-228ENST00000619157 SYPL2Q5VXT5 272 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 BTBD8Q5XKL5 378 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 NADSYN1Q6IA69 706 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 CAVIN1Q6NZI2 390 aaKnown RBP7.75□□□□□ -1.17
CBWD1-228ENST00000619157 SASS6Q6UVJ0 657 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 TPGS1Q6ZTW0 290 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 PROSER1Q86XN7 944 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 DENND1CQ8IV53 801 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 SIX6OS1Q8N1H7 587 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 DCLK2Q8N568 766 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 AOPEPQ8N6M6 819 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 IL17RCQ8NAC3 791 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 C1orf131Q8NDD1 294 aaKnown RBP7.75□□□□□ -1.17
CBWD1-228ENST00000619157 OLIG1Q8TAK6 271 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 DQX1Q8TE96 717 aaKnown RBP7.75□□□□□ -1.17
CBWD1-228ENST00000619157 CPLX3Q8WVH0 158 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 IRGQQ8WZA9 623 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 DNAI2Q9GZS0 605 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 ZSCAN32Q9NX65 697 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 CALCOCO1Q9P1Z2 691 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 STOML2Q9UJZ1 356 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 NAALADL1Q9UQQ1 740 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 PCDHGA2Q9Y5H1 932 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 ATG2BQ96BY7 2078 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 LAMA1P25391 3075 aa7.75□□□□□ -1.17
CBWD1-228ENST00000619157 CEP250Q9BV73 2442 aa7.74□□□□□ -1.17
CBWD1-228ENST00000619157 PTPRZ1P23471 2315 aaPredicted RBP7.74□□□□□ -1.17
CBWD1-228ENST00000619157 GOLGA6L7A0A1B0GV03 622 aa7.74□□□□□ -1.17
CBWD1-228ENST00000619157 F8VZ95 297 aa7.74□□□□□ -1.17
CBWD1-228ENST00000619157 GOLGA6L22H0YM25 854 aa7.74□□□□□ -1.17
CBWD1-228ENST00000619157 SGK1O00141 431 aa7.74□□□□□ -1.17
CBWD1-228ENST00000619157 TEX33O43247 280 aa7.74□□□□□ -1.17
CBWD1-228ENST00000619157 IGLV3-25P01717 112 aa7.74□□□□□ -1.17
CBWD1-228ENST00000619157 TYRP14679 529 aa7.74□□□□□ -1.17
CBWD1-228ENST00000619157 CHRNB2P17787 502 aa7.74□□□□□ -1.17
CBWD1-228ENST00000619157 HOXA6P31267 233 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms