RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 ZFP1Q6P2D0 407 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 IYDQ6PHW0 289 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 LCA5Q86VQ0 697 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 MARVELD2Q8N4S9 558 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 CEP70Q8NHQ1 597 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 PDCD6IPQ8WUM4 868 aaKnown RBP11.91□□□□□ -0.5
C11orf54-215ENST00000617482 NAT14Q8WUY8 206 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 NMD3Q96D46 503 aaKnown RBP11.91□□□□□ -0.5
C11orf54-215ENST00000617482 PHF21BQ96EK2 531 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 TMEM209Q96SK2 561 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 MRPL57Q9BQC6 102 aaKnown RBP11.91□□□□□ -0.5
C11orf54-215ENST00000617482 PCDHAC1Q9H158 963 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 CSNK1G1Q9HCP0 422 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 MPP6Q9NZW5 540 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 APPL1Q9UKG1 709 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 AP4B1Q9Y6B7 739 aa11.91□□□□□ -0.5
C11orf54-215ENST00000617482 ACOT8O14734 319 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 MATN3O15232 486 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 BCAS2O75934 225 aaPredicted RBP11.9□□□□□ -0.5
C11orf54-215ENST00000617482 SMIM18P0DKX4 95 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 ATP6V1B1P15313 513 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 PCSK1P29120 753 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 ADSLP30566 484 aaPredicted RBP11.9□□□□□ -0.5
C11orf54-215ENST00000617482 ADRA1AP35348 466 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 ZNF135P52742 658 aaPredicted RBP11.9□□□□□ -0.5
C11orf54-215ENST00000617482 NEPROQ6NW34 567 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 POTEHQ6S545 545 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 PIWIL4Q7Z3Z4 852 aaKnown RBP11.9□□□□□ -0.5
C11orf54-215ENST00000617482 C2CD4AQ8NCU7 369 aaPredicted RBP11.9□□□□□ -0.5
C11orf54-215ENST00000617482 FCRL2Q96LA5 508 aaPredicted RBP11.9□□□□□ -0.5
C11orf54-215ENST00000617482 IL12RB2Q99665 862 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 OLFM1Q99784 485 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 MRPL1Q9BYD6 325 aaKnown RBP11.9□□□□□ -0.5
C11orf54-215ENST00000617482 TRPC7Q9HCX4 862 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 IGSF5Q9NSI5 407 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 BCAP29Q9UHQ4 241 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 LZTS1Q9Y250 596 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 PDCD11Q14690 1871 aaKnown RBP11.9□□□□□ -0.5
C11orf54-215ENST00000617482 TRPC5OSA6NMA1 111 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 NPHS1O60500 1241 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 RNASEH2AO75792 299 aaKnown RBP11.9□□□□□ -0.5
C11orf54-215ENST00000617482 B3GAT3O94766 335 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 MT-CO1P00395 513 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 CPB1P15086 417 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 ATP5F1P24539 256 aaPredicted RBP11.9□□□□□ -0.5
C11orf54-215ENST00000617482 BRCC3P46736 316 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 GEMP55040 296 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 RPL26P61254 145 aaKnown RBP11.9□□□□□ -0.5
C11orf54-215ENST00000617482 SULT2A1Q06520 285 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 PDAP1Q13442 181 aaKnown RBP11.9□□□□□ -0.5
C11orf54-215ENST00000617482 HERC3Q15034 1050 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 CCL14Q16627 93 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 LRRTM3Q86VH5 581 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 PIP4K2CQ8TBX8 421 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 SPPL2BQ8TCT7 592 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 NCSTNQ92542 709 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 ATP6V1E2Q96A05 226 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 MRGPRX2Q96LB1 330 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 SEMA6AQ9H2E6 1030 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 Q9H521 79 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 ENTPD7Q9NQZ7 604 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 TREX1Q9NSU2 369 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 ARHGEF38Q9NXL2 777 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 CCDC167Q9P0B6 97 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 BRCA2P51587 3418 aa11.9□□□□□ -0.5
C11orf54-215ENST00000617482 CCL22O00626 93 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 AP1G1O43747 822 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 RTN3O95197 1032 aaPredicted RBP11.89□□□□□ -0.51
C11orf54-215ENST00000617482 CLPTM1O96005 669 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 POMCP01189 267 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 TFAP2AP05549 437 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 ZNF865P0CJ78 1059 aaPredicted RBP11.89□□□□□ -0.51
C11orf54-215ENST00000617482 CCDC166P0CW27 439 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 PAMP19021 973 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 TSPAN8P19075 237 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 C1QTNF8P60827 252 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 PSME3P61289 254 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 CDKL1Q00532 357 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 ZNF33AQ06730 810 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 UPP1Q16831 310 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 IL23RQ5VWK5 629 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 BTBD8Q5XKL5 378 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 PAOXQ6QHF9 649 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 RANBP10Q6VN20 620 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 KLHDC8BQ8IXV7 354 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 SDR16C5Q8N3Y7 309 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 ADCY4Q8NFM4 1077 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 IRGQQ8WZA9 623 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 MAELQ96JY0 434 aaKnown RBP11.89□□□□□ -0.51
C11orf54-215ENST00000617482 PTPN18Q99952 460 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 CPA4Q9UI42 421 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 PCDHGA7Q9Y5G6 932 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 COMMD3-BMI1R4GMX3 469 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 A0A087X1B8 175 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 PRSS51A0A1B0GVH4 220 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 E7ENX8 843 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 POLD2P49005 469 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 CPT1AP50416 773 aa11.89□□□□□ -0.51
C11orf54-215ENST00000617482 POU4F1Q01851 419 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms