RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 RAD51BO15315 384 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 PRAMEF11O60813 436 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 PALMO75781 387 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 GP1BAP07359 652 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 CKMT1AP12532 417 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 NME1P15531 152 aaKnown RBP9.79□□□□□ -0.84
TARDBP-218ENST00000617172 TIMP2P16035 220 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 PCK1P35558 622 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 ABL2P42684 1182 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 THOP1P52888 689 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 PFN3P60673 137 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 NSUN2Q08J23 767 aaKnown RBP eCLIP9.79□□□□□ -0.84
TARDBP-218ENST00000617172 TARDBPQ13148 414 aaKnown RBP eCLIP9.79□□□□□ -0.842e-18■■■■□ 20.4
TARDBP-218ENST00000617172 FZD2Q14332 565 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 IQCB1Q15051 598 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 CYTH1Q15438 398 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 UGP2Q16851 508 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 BOLA3Q53S33 107 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 CFAP58Q5T655 872 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 HES3Q5TGS1 186 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 BRAT1Q6PJG6 821 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 RFX8Q6ZV50 586 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 VOPP1Q96AW1 172 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 NXPE2Q96DL1 559 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 KLC2Q9H0B6 622 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 ISCUQ9H1K1 167 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 SUV39H2Q9H5I1 410 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 DHX35Q9H5Z1 703 aaKnown RBP9.79□□□□□ -0.84
TARDBP-218ENST00000617172 ZWILCHQ9H900 591 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 UCKL1Q9NWZ5 548 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 CNOT8Q9UFF9 292 aaKnown RBP9.79□□□□□ -0.84
TARDBP-218ENST00000617172 PCSK1NQ9UHG2 260 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 CLCA2Q9UQC9 943 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 GPSM3Q9Y4H4 160 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 PLXNA2O75051 1894 aa9.79□□□□□ -0.84
TARDBP-218ENST00000617172 DOCK4Q8N1I0 1966 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 A0A1W2PQJ5 194 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 CFAP69A5D8W1 941 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 DDX3XO00571 662 aaKnown RBP eCLIP9.78□□□□□ -0.84
TARDBP-218ENST00000617172 TPP1O14773 563 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 FFAR2O15552 330 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 JUNDP17535 347 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 ERCC2P18074 760 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 PTMSP20962 102 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 MIPP30301 263 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 PEX5P50542 639 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 PAPOLAP51003 745 aaKnown RBP9.78□□□□□ -0.84
TARDBP-218ENST00000617172 BLKP51451 505 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 RENBPP51606 427 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 POLR2LP62875 67 aaKnown RBP9.78□□□□□ -0.84
TARDBP-218ENST00000617172 PDE1CQ14123 709 aaPredicted RBP9.78□□□□□ -0.84
TARDBP-218ENST00000617172 PIGHQ14442 188 aaPredicted RBP9.78□□□□□ -0.84
TARDBP-218ENST00000617172 RTP5Q14D33 572 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 KLHL40Q2TBA0 621 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 TMEM52BQ4KMG9 183 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 TMCO4Q5TGY1 634 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 ZCCHC8Q6NZY4 707 aaKnown RBP9.78□□□□□ -0.84
TARDBP-218ENST00000617172 ERAP2Q6P179 960 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 ARFGAP1Q8N6T3 406 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 ZNF653Q96CK0 615 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 APOLD1Q96LR9 279 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 TBATAQ96M53 351 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 SNRNP25Q9BV90 132 aaKnown RBP9.78□□□□□ -0.84
TARDBP-218ENST00000617172 SLC39A8Q9C0K1 460 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 ATP13A3Q9H7F0 1226 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 PDFQ9HBH1 243 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 SCUBE2Q9NQ36 999 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 SPASTQ9UBP0 616 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 LHX3Q9UBR4 397 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 SALL4Q9UJQ4 1053 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 LHX6Q9UPM6 363 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 RAXQ9Y2V3 346 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 KNTC1P50748 2209 aa9.78□□□□□ -0.84
TARDBP-218ENST00000617172 CHD6Q8TD26 2715 aa9.77□□□□□ -0.84
TARDBP-218ENST00000617172 A0A087WV48 116 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 TSPAN11A1L157 253 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 H3BRJ5 948 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 J3KR12 359 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 K7ESM1 405 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 SPINT1O43278 529 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 ATMINO43313 823 aaPredicted RBP9.77□□□□□ -0.85
TARDBP-218ENST00000617172 AQP9O43315 295 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 MMP20O60882 483 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 LRCH4O75427 683 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 GIMD1P0DJR0 217 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 SKILP12757 684 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 SERPINA4P29622 427 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 ARL4AP40617 200 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 RPIAP49247 311 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 UBASH3AP57075 661 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 INSM1Q01101 510 aaPredicted RBP9.77□□□□□ -0.85
TARDBP-218ENST00000617172 IL10RBQ08334 325 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 LRRC14Q15048 493 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 AGERQ15109 404 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 TDRD12Q587J7 1177 aaKnown RBP9.77□□□□□ -0.85
TARDBP-218ENST00000617172 ZNF542PQ5EBM4 170 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 PPP6R3Q5H9R7 873 aaPredicted RBP9.77□□□□□ -0.85
TARDBP-218ENST00000617172 AFMIDQ63HM1 303 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 SRLQ86TD4 932 aa9.77□□□□□ -0.85
TARDBP-218ENST00000617172 MARCH9Q86YJ5 346 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms