RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 NAT9Q9BTE0 207 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 HERC2P3Q9BVR0 1158 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 POLR1EQ9GZS1 481 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 MCOLN1Q9GZU1 580 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 ZBP1Q9H171 429 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 LINC00597Q9H2U6 94 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 CCDC134Q9H6E4 229 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 PPCSQ9HAB8 311 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 MARCH4Q9P2E8 410 aaPredicted RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 FETUBQ9UGM5 382 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 ZNF180Q9UJW8 692 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 TCAF1Q9Y4C2 921 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 WASH4PA8MWX3 477 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 TM9SF1O15321 606 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 GLUD1P00367 558 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 ADH1AP07327 375 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 SERPINF2P08697 491 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 PPM1AP35813 382 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 STK19P49842 368 aaPredicted RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 SERPINB9P50453 376 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 CDH4P55283 916 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 NRG1Q02297 640 aaPredicted RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 CDK18Q07002 472 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 ITGA9Q13797 1035 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 CYTH1Q15438 398 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 TEAD2Q15562 447 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 FBXO48Q5FWF7 155 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 PPM1LQ5SGD2 360 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 C9orf50Q5SZB4 431 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 GPR158Q5T848 1215 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 GRTP1Q5TC63 336 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 TMCO4Q5TGY1 634 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 SNX30Q5VWJ9 437 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 FBXW10Q5XX13 1052 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 NEPROQ6NW34 567 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 RPS27LQ71UM5 84 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 GRASPQ7Z6J2 395 aaPredicted RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 CAMK1DQ8IU85 385 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 CCNJLQ8IV13 435 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 MFN1Q8IWA4 741 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 MFSD6LQ8IWD5 586 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 TDRD5Q8NAT2 981 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 RIN3Q8TB24 985 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 EXT2Q93063 718 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 ERP27Q96DN0 273 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 MYRFLQ96LU7 910 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 CPNE1Q99829 537 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 KIFC1Q9BW19 673 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 OXCT2Q9BYC2 517 aaPredicted RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 TASP1Q9H6P5 420 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 SCUBE2Q9NQ36 999 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 EMCNQ9ULC0 261 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 G3BP2Q9UN86 482 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 RUVBL2Q9Y230 463 aaKnown RBP3.47□□□□□ -1.85
LIG4-205ENST00000614526 ARL2BPQ9Y2Y0 163 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 FIS1Q9Y3D6 152 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 SPO11Q9Y5K1 396 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 NUMBLQ9Y6R0 609 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 MYOFQ9NZM1 2061 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 GREB1Q4ZG55 1949 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 COL4A6Q14031 1691 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 A0A1B0GVM2 712 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 UBA6A0AVT1 1052 aaPredicted RBP3.46□□□□□ -1.85
LIG4-205ENST00000614526 MAGEB16A2A368 324 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 TCAF2A6NFQ2 919 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 NEMP2A6NFY4 417 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 TK2O00142 265 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 CACNG3O60359 315 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 LILRB3O75022 631 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 CLDN11O75508 207 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 TMCC1O94876 653 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 PRAMEF12O95522 483 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 CA3P07451 260 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 GSTA2P09210 222 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 ALPIP09923 528 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 LINC00271P0C7V0 271 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 ALDH3A1P30838 453 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 CTSOP43234 321 aaPredicted RBP3.46□□□□□ -1.85
LIG4-205ENST00000614526 MAPKAPK2P49137 400 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 CDKN1CP49918 316 aaPredicted RBP3.46□□□□□ -1.85
LIG4-205ENST00000614526 PLK1P53350 603 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 LIMK2P53671 638 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 EPHB1P54762 984 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 CORO7P57737 925 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 YBEYP58557 167 aaPredicted RBP3.46□□□□□ -1.85
LIG4-205ENST00000614526 TAS2R39P59534 338 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 RHOAP61586 193 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 ARF5P84085 180 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 ZBTB16Q05516 673 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 RASA2Q15283 850 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 SLC5A9Q2M3M2 681 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 POM121L1PQ3SYA9 428 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 CXorf57Q6NSI4 855 aaKnown RBP3.46□□□□□ -1.85
LIG4-205ENST00000614526 TMC5Q6UXY8 1006 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 ATG14Q6ZNE5 492 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 TBC1D1Q86TI0 1168 aaPredicted RBP3.46□□□□□ -1.85
LIG4-205ENST00000614526 MTDHQ86UE4 582 aaKnown RBP3.46□□□□□ -1.85
LIG4-205ENST00000614526 ITIH5Q86UX2 942 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 PIM3Q86V86 326 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 ZC3HC1Q86WB0 502 aaKnown RBP3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms