RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 MX2P20592 715 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 GKP32189 559 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 SLC1A1P43005 524 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 MAGEA1P43355 309 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 NXPH1P58417 271 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 AP1S1P61966 158 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 CYTH1Q15438 398 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 ASTE1Q2TB18 679 aaPredicted RBP12.47□□□□□ -0.41
CBWD3-208ENST00000612050 ZNF284Q2VY69 593 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 MARC1Q5VT66 337 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 AFMIDQ63HM1 303 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 CYP4V2Q6ZWL3 525 aaPredicted RBP12.47□□□□□ -0.41
CBWD3-208ENST00000612050 PTAR1Q7Z6K3 402 aaPredicted RBP12.47□□□□□ -0.41
CBWD3-208ENST00000612050 SRLQ86TD4 932 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 NDUFAF2Q8N183 169 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 TXLNBQ8N3L3 684 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 DENND6BQ8NEG7 585 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 TMEM131Q92545 1883 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 MRFAP1L1Q96HT8 127 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 ORAI3Q9BRQ5 295 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 KLC2Q9H0B6 622 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 EBF2Q9HAK2 575 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 LHX3Q9UBR4 397 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 FTSJ1Q9UET6 329 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 HS3ST3A1Q9Y663 406 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 A0A1W2PR77 199 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 GIPC1O14908 333 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 SPOPO43791 374 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 PAK4O96013 591 aaPredicted RBP12.46□□□□□ -0.41
CBWD3-208ENST00000612050 ALPPL2P10696 532 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 CA4P22748 312 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 RABIFP47224 123 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 SCNN1BP51168 640 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 THOP1P52888 689 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 BNC1Q01954 994 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 PTK2BQ14289 1009 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 RALGPS1Q5JS13 557 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 SEL1L3Q68CR1 1132 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 ARHGAP12Q8IWW6 846 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 NPWQ8N729 165 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 TSEN2Q8NCE0 465 aaKnown RBP12.46□□□□□ -0.41
CBWD3-208ENST00000612050 ASB12Q8WXK4 309 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 CALR3Q96L12 384 aaKnown RBP12.46□□□□□ -0.41
CBWD3-208ENST00000612050 PSKH2Q96QS6 385 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 PACSIN1Q9BY11 444 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 SCUBE2Q9NQ36 999 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 DDX56Q9NY93 547 aaKnown RBP12.46□□□□□ -0.41
CBWD3-208ENST00000612050 PCOLCE2Q9UKZ9 415 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 NENFQ9UMX5 172 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.46□□□□□ -0.41
CBWD3-208ENST00000612050 SLCO1B1Q9Y6L6 691 aa12.46□□□□□ -0.41
CBWD3-208ENST00000612050 TRPM6Q9BX84 2022 aa12.46□□□□□ -0.42
CBWD3-208ENST00000612050 WDR87Q6ZQQ6 2873 aa12.46□□□□□ -0.42
CBWD3-208ENST00000612050 SPAARA0A1B0GVQ0 90 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 LRRD1A4D1F6 860 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 IGLON5A6NGN9 336 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 KCNK3O14649 394 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 TOR1BO14657 336 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 LZTS3O60299 673 aaPredicted RBP12.45□□□□□ -0.42
CBWD3-208ENST00000612050 PIGNO95427 931 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 WNT1P04628 370 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 TCF4P15884 667 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 ZFXP17010 805 aaPredicted RBP12.45□□□□□ -0.42
CBWD3-208ENST00000612050 ABL2P42684 1182 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 MMP13P45452 471 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 ZNF75DP51815 510 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 IL9RQ01113 521 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 ITKQ08881 620 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 TBX2Q13207 712 aaPredicted RBP12.45□□□□□ -0.42
CBWD3-208ENST00000612050 DPYSL3Q14195 570 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 IFI16Q16666 785 aaKnown RBP12.45□□□□□ -0.42
CBWD3-208ENST00000612050 UGP2Q16851 508 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 TMEM259Q4ZIN3 620 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 ANKRD20A8PQ5CZ79 823 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 KYAT3Q6YP21 454 aaKnown RBP12.45□□□□□ -0.42
CBWD3-208ENST00000612050 GLRX5Q86SX6 157 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 RHOT1Q8IXI2 618 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 ATL2Q8NHH9 583 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 IFT43Q96FT9 208 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 LENG8Q96PV6 779 aaPredicted RBP12.45□□□□□ -0.42
CBWD3-208ENST00000612050 FZD3Q9NPG1 666 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 ZFR2Q9UPR6 939 aaKnown RBP12.45□□□□□ -0.42
CBWD3-208ENST00000612050 ASCC3Q8N3C0 2202 aaKnown RBP12.45□□□□□ -0.42
CBWD3-208ENST00000612050 NEMP2A6NFY4 417 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 TNFSF14O43557 240 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 SOCS5O75159 536 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 MTA2O94776 668 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 CDK4P11802 303 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 CES1P23141 567 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 EPHA8P29322 1005 aaPredicted RBP12.45□□□□□ -0.42
CBWD3-208ENST00000612050 PMLP29590 882 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 RXRGP48443 463 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 NAP1L1P55209 391 aaKnown RBP12.45□□□□□ -0.42
CBWD3-208ENST00000612050 FAM193AP78312 1265 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 TXNRD3NBQ6F5E7 133 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 Q6ZSR6 202 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 BZW1Q7L1Q6 419 aaKnown RBP12.45□□□□□ -0.42
CBWD3-208ENST00000612050 TMTC1Q8IUR5 882 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 TMEM145Q8NBT3 493 aa12.45□□□□□ -0.42
CBWD3-208ENST00000612050 CCNYQ8ND76 341 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms