RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 LMAN2Q12907 356 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 FRG1Q14331 258 aaKnown RBP12.9□□□□□ -0.34
ZNF548-210ENST00000600442 SPARCL1Q14515 664 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 FASTKD3Q14CZ7 662 aaKnown RBP12.9□□□□□ -0.34
ZNF548-210ENST00000600442 DHCR24Q15392 516 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 PCSK7Q16549 785 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 MSS51Q4VC12 460 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 FSCBQ5H9T9 825 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 PITRM1Q5JRX3 1037 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 RANBP10Q6VN20 620 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 CAPN12Q6ZSI9 719 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 LRRC6Q86X45 466 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 OR2W6PQ8NHA6 318 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 FAM76AQ8TAV0 307 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 FBF1Q8TES7 1133 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 TTC17Q96AE7 1141 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 SIGLEC10Q96LC7 697 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 ARNT2Q9HBZ2 717 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 MRM3Q9HC36 420 aaKnown RBP12.9□□□□□ -0.34
ZNF548-210ENST00000600442 FAM53CQ9NYF3 392 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 PLK2Q9NYY3 685 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 PSMC3IPQ9P2W1 217 aaPredicted RBP12.9□□□□□ -0.34
ZNF548-210ENST00000600442 PLA2G4CQ9UP65 541 aa12.9□□□□□ -0.34
ZNF548-210ENST00000600442 GVINP1Q7Z2Y8 2422 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 IQANK1A0A1B0GTG1 560 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 POC1B-GALNT4F8VUJ3 575 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 ATP9BO43861 1147 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 ZMPSTE24O75844 475 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 KRT37O76014 449 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 KRT38O76015 456 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 CRTAMO95727 393 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 NDST3O95803 873 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 SYF2O95926 243 aaKnown RBP12.89□□□□□ -0.35
ZNF548-210ENST00000600442 MT-CYBP00156 380 aaPredicted RBP12.89□□□□□ -0.35
ZNF548-210ENST00000600442 SHBGP04278 402 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 CNTFP26441 200 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 SSTR1P30872 391 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 VIPR2P41587 438 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 DGKGP49619 791 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 SERPINB9P50453 376 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 NUBP1P53384 320 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 MAXP61244 160 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 RPL26P61254 145 aaKnown RBP12.89□□□□□ -0.35
ZNF548-210ENST00000600442 SKOR1P84550 965 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 LEKR1Q6ZMV7 388 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 MFSD6LQ8IWD5 586 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 CTAGE3PQ8IX95 158 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 RYBPQ8N488 228 aaPredicted RBP12.89□□□□□ -0.35
ZNF548-210ENST00000600442 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.89□□□□□ -0.35
ZNF548-210ENST00000600442 ELSPBP1Q96BH3 223 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 LINC00597Q9H2U6 94 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 EPB41L4BQ9H329 900 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 ATP13A3Q9H7F0 1226 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 VPS18Q9P253 973 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 DEC1Q9P2X7 70 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 RABGEF1Q9UJ41 708 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 CDH22Q9UJ99 828 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 RPL26L1Q9UNX3 145 aaKnown RBP12.89□□□□□ -0.35
ZNF548-210ENST00000600442 RPS6KL1Q9Y6S9 549 aa12.89□□□□□ -0.35
ZNF548-210ENST00000600442 LOC285095A0A1B0GVY8 99 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 TCRBV9S1A1TA0A576 114 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 PROB1E7EW31 1015 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 GALR2O43603 387 aaPredicted RBP12.88□□□□□ -0.35
ZNF548-210ENST00000600442 SNAP91O60641 907 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 USP12O75317 370 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 PSMC3P17980 439 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 KRT15P19012 456 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 CD70P32970 193 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 ADRA1AP35348 466 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 SLCO1A2P46721 670 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 EPHB1P54762 984 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 ARF5P84085 180 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 BCL2L1Q07817 233 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 MGAT5Q09328 741 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 NIPAL4Q0D2K0 466 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 MTM1Q13496 603 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 EIF4HQ15056 248 aaKnown RBP12.88□□□□□ -0.35
ZNF548-210ENST00000600442 CYTH1Q15438 398 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 SLC1A5Q15758 541 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 LONRF1Q17RB8 773 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 SKIDA1Q1XH10 827 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 EML3Q32P44 896 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 ACCSLQ4AC99 568 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 STEAP4Q687X5 459 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 GRAMD4Q6IC98 578 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 PKN3Q6P5Z2 889 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 KDELC1Q6UW63 502 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 LINGO4Q6UY18 593 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 UNC5AQ6ZN44 842 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 ZNF534Q76KX8 674 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 SRLQ86TD4 932 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 PRPF39Q86UA1 669 aaKnown RBP12.88□□□□□ -0.35
ZNF548-210ENST00000600442 SLC26A11Q86WA9 606 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 PCDH20Q8N6Y1 951 aaKnown RBP12.88□□□□□ -0.35
ZNF548-210ENST00000600442 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.88□□□□□ -0.35
ZNF548-210ENST00000600442 OR52K2Q8NGK3 314 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 ARRDC2Q8TBH0 407 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 UCMAQ8WVF2 138 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 PEX13Q92968 403 aa12.88□□□□□ -0.35
ZNF548-210ENST00000600442 RMDN1Q96DB5 314 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms