RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 LHX3Q9UBR4 397 aa16■□□□□ 0.15
VRK3-221ENST00000600284 PCSK1NQ9UHG2 260 aa16■□□□□ 0.15
VRK3-221ENST00000600284 IPO11Q9UI26 975 aaKnown RBP16■□□□□ 0.15
VRK3-221ENST00000600284 CSNK1G3Q9Y6M4 447 aa16■□□□□ 0.15
VRK3-221ENST00000600284 ZZEF1O43149 2961 aa16■□□□□ 0.15
VRK3-221ENST00000600284 KNTC1P50748 2209 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 A0A1W2PQJ5 194 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 H3BM21 787 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 DAPK3O43293 454 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 ATMINO43313 823 aaPredicted RBP15.99■□□□□ 0.15
VRK3-221ENST00000600284 TM7SF2O76062 418 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 GIMD1P0DJR0 217 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 CKMT1AP12532 417 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 NME1P15531 152 aaKnown RBP15.99■□□□□ 0.15
VRK3-221ENST00000600284 TIMP2P16035 220 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 MIPP30301 263 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 CSNK1DP48730 415 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 PFN3P60673 137 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 YPEL5P62699 121 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 CYP4F3Q08477 520 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 ELP6Q0PNE2 266 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 PTK2BQ14289 1009 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 KLHL40Q2TBA0 621 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 AFMIDQ63HM1 303 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 MARCH9Q86YJ5 346 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 FAM181AQ8N9Y4 354 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 CXorf40AQ8TE69 158 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 SYN2Q92777 582 aaPredicted RBP15.99■□□□□ 0.15
VRK3-221ENST00000600284 ZNF653Q96CK0 615 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 IQCDQ96DY2 449 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 TUBGCP5Q96RT8 1024 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 SLC39A8Q9C0K1 460 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 SUV39H2Q9H5I1 410 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 EVA1BQ9NVM1 165 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 GPATCH2LQ9NWQ4 482 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 GGT7Q9UJ14 662 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 ITM2BQ9Y287 266 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 FREM2Q5SZK8 3169 aa15.99■□□□□ 0.15
VRK3-221ENST00000600284 GOLGA4Q13439 2230 aaKnown RBP15.98■□□□□ 0.15
VRK3-221ENST00000600284 TSPAN11A1L157 253 aa15.98■□□□□ 0.15
VRK3-221ENST00000600284 ERCC2P18074 760 aa15.98■□□□□ 0.15
VRK3-221ENST00000600284 PCK1P35558 622 aa15.98■□□□□ 0.15
VRK3-221ENST00000600284 PAPOLAP51003 745 aaKnown RBP15.98■□□□□ 0.15
VRK3-221ENST00000600284 DUSP3P51452 185 aaPredicted RBP15.98■□□□□ 0.15
VRK3-221ENST00000600284 DAB2P98082 770 aa15.98■□□□□ 0.15
VRK3-221ENST00000600284 NSUN2Q08J23 767 aaKnown RBP eCLIP15.98■□□□□ 0.15
VRK3-221ENST00000600284 PDE1CQ14123 709 aaPredicted RBP15.98■□□□□ 0.15
VRK3-221ENST00000600284 RFTN1Q14699 578 aaPredicted RBP15.98■□□□□ 0.15
VRK3-221ENST00000600284 CA9Q16790 459 aa15.98■□□□□ 0.15
VRK3-221ENST00000600284 TMEM52BQ4KMG9 183 aa15.98■□□□□ 0.15
VRK3-221ENST00000600284 HES3Q5TGS1 186 aa15.98■□□□□ 0.15
VRK3-221ENST00000600284 BRAT1Q6PJG6 821 aa15.98■□□□□ 0.15
VRK3-221ENST00000600284 LZTR1Q8N653 840 aa15.98■□□□□ 0.15
VRK3-221ENST00000600284 BTN2A2Q8WVV5 523 aa15.98■□□□□ 0.15
VRK3-221ENST00000600284 PEBP4Q96S96 227 aa15.98■□□□□ 0.15
VRK3-221ENST00000600284 KCTD15Q96SI1 283 aaPredicted RBP15.98■□□□□ 0.15
VRK3-221ENST00000600284 NRSN2Q9GZP1 204 aa15.98■□□□□ 0.15
VRK3-221ENST00000600284 GPSM3Q9Y4H4 160 aa15.98■□□□□ 0.15
VRK3-221ENST00000600284 CHD6Q8TD26 2715 aa15.98■□□□□ 0.15
VRK3-221ENST00000600284 J3KR12 359 aa15.97■□□□□ 0.15
VRK3-221ENST00000600284 MMP20O60882 483 aa15.97■□□□□ 0.15
VRK3-221ENST00000600284 LRCH4O75427 683 aa15.97■□□□□ 0.15
VRK3-221ENST00000600284 GP1BAP07359 652 aa15.97■□□□□ 0.15
VRK3-221ENST00000600284 SKILP12757 684 aa15.97■□□□□ 0.15
VRK3-221ENST00000600284 XPAP23025 273 aaPredicted RBP15.97■□□□□ 0.15
VRK3-221ENST00000600284 PBX1P40424 430 aa15.97■□□□□ 0.15
VRK3-221ENST00000600284 FANCCQ00597 558 aa15.97■□□□□ 0.15
VRK3-221ENST00000600284 TARDBPQ13148 414 aaKnown RBP eCLIP15.97■□□□□ 0.15
VRK3-221ENST00000600284 UGP2Q16851 508 aa15.97■□□□□ 0.15
VRK3-221ENST00000600284 BOLA3Q53S33 107 aa15.97■□□□□ 0.15
VRK3-221ENST00000600284 ZNF542PQ5EBM4 170 aa15.97■□□□□ 0.15
VRK3-221ENST00000600284 CYP4V2Q6ZWL3 525 aaPredicted RBP15.97■□□□□ 0.15
VRK3-221ENST00000600284 VPS36Q86VN1 386 aa15.97■□□□□ 0.15
VRK3-221ENST00000600284 NXPE2Q96DL1 559 aa15.97■□□□□ 0.15
VRK3-221ENST00000600284 CELF6Q96J87 481 aaKnown RBP15.97■□□□□ 0.15
VRK3-221ENST00000600284 TBATAQ96M53 351 aa15.97■□□□□ 0.15
VRK3-221ENST00000600284 TRIM7Q9C029 511 aa15.97■□□□□ 0.15
VRK3-221ENST00000600284 ZWILCHQ9H900 591 aa15.97■□□□□ 0.15
VRK3-221ENST00000600284 CBX8Q9HC52 389 aa15.97■□□□□ 0.15
VRK3-221ENST00000600284 NCKIPSDQ9NZQ3 722 aa15.97■□□□□ 0.15
VRK3-221ENST00000600284 SYCE3A1L190 88 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 K7ESM1 405 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 TPP1O14773 563 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 INSIG1O15503 277 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 FFAR2O15552 330 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 PALMO75781 387 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 THOP1P52888 689 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 UBASH3AP57075 661 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 INSM1Q01101 510 aaPredicted RBP15.96■□□□□ 0.15
VRK3-221ENST00000600284 IL10RBQ08334 325 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 PIGHQ14442 188 aaPredicted RBP15.96■□□□□ 0.15
VRK3-221ENST00000600284 RTP5Q14D33 572 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 AGERQ15109 404 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 PPP6R3Q5H9R7 873 aaPredicted RBP15.96■□□□□ 0.15
VRK3-221ENST00000600284 HGSNATQ68CP4 663 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 ERAP2Q6P179 960 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 ARHGAP12Q8IWW6 846 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 DCBLD1Q8N8Z6 715 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 TP53I13Q8NBR0 393 aaPredicted RBP15.96■□□□□ 0.15
VRK3-221ENST00000600284 NETO2Q8NC67 525 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms