RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 SEL1L3Q68CR1 1132 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 LRRC74BQ6ZQY2 392 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 MYEOVQ96EZ4 313 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 PANX3Q96QZ0 392 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 CDH19Q9H159 772 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 ALG9Q9H6U8 611 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 SARS2Q9NP81 518 aaKnown RBP11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 PCDHB8Q9UN66 801 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 A0A0D9SEW6 157 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 FGF10O15520 208 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 ALDH2P05091 517 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 RAB10P61026 200 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 LRRC8EQ6NSJ5 796 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 RNF19BQ6ZMZ0 732 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 LINC01599Q8WXQ3 324 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 TBATAQ96M53 351 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 ARL5AQ9Y689 179 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 ARHGEF37A1IGU5 675 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 NCF1BA6NI72 391 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 NCF1CA8MVU1 366 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 CAPN14A8MX76 684 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 TNFRSF10BO14763 440 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 KLHL2O95198 593 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 LINGO3P0C6S8 592 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 NCF1P14598 390 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 SERPINH1P50454 418 aaKnown RBP11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 RENBPP51606 427 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 ARSDP51689 593 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 RPS24P62847 133 aaKnown RBP11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 DSC3Q14574 896 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 TAS1R1Q7RTX1 841 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 MFSD6LQ8IWD5 586 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 MAB21L3Q8N8X9 362 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 FCRL5Q96RD9 977 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 HAPLN3Q96S86 360 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 TRIM62Q9BVG3 475 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 GKN1Q9NS71 199 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 MKS1Q9NXB0 559 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 ADAM28Q9UKQ2 775 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 COMMD10Q9Y6G5 202 aa11.64□□□□□ -0.55
ARHGEF1-220ENST00000600274 C9JVG2 144 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 CBX4O00257 560 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 TRAFD1O14545 582 aaPredicted RBP11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 DLX3O60479 287 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 TBL3Q12788 808 aaKnown RBP11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 DLG1Q12959 904 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 NAB1Q13506 487 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 PTPRRQ15256 657 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 UGP2Q16851 508 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 DNAL1Q4LDG9 190 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 RTP2Q5QGT7 225 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 RABGAP1LQ5R372 815 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 TIGD7Q6NT04 549 aaPredicted RBP11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 RSPO2Q6UXX9 243 aaPredicted RBP11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 FAM156AQ8NDB6 213 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 ENTPD7Q9NQZ7 604 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 NDE1Q9NXR1 346 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 PPM1HQ9ULR3 514 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 FAM50BQ9Y247 325 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 PCDHB12Q9Y5F1 795 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 ZSWIM8A7E2V4 1837 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 SUPT7LO94864 414 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 CYP11A1P05108 521 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 PYGLP06737 847 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 TFEBP19484 476 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 SP100P23497 879 aaPredicted RBP11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 VHLP40337 213 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 SLC34A1Q06495 639 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 GRAMD1BQ3KR37 738 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 DENND5AQ6IQ26 1287 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 DENND1CQ8IV53 801 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 CENPLQ8N0S6 344 aaPredicted RBP11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 ATP6V0D2Q8N8Y2 350 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 OR13C4Q8NGS5 318 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 SH3TC2Q8TF17 1288 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 NRG4Q8WWG1 115 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 FBXO44Q9H4M3 255 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 CORO1CQ9ULV4 474 aaPredicted RBP11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 SLC4A7Q9Y6M7 1214 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 ANKRD12Q6UB98 2062 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 STX16-NPEPL1H3BU86 382 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 GLDCP23378 1020 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 ARNTP27540 789 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 CSE1LP55060 971 aaKnown RBP11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 LSM12Q3MHD2 195 aaKnown RBP11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 GPR158Q5T848 1215 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 LINGO4Q6UY18 593 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 ACAD11Q709F0 780 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 LZTR1Q8N653 840 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 CMTM5Q96DZ9 223 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 GPR22Q99680 433 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 OLFM1Q99784 485 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 KIFC1Q9BW19 673 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 NOL6Q9H6R4 1146 aaKnown RBP11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 TRPC7Q9HCX4 862 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 PRM3Q9NNZ6 103 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 BPIFA1Q9NP55 256 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 MARCH4Q9P2E8 410 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms