RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 HGSNATQ68CP4 663 aa23.76■■□□□ 1.39
LSM4-204ENST00000594828 CYP4V2Q6ZWL3 525 aaPredicted RBP23.76■■□□□ 1.39
LSM4-204ENST00000594828 MDM1Q8TC05 714 aa23.76■■□□□ 1.39
LSM4-204ENST00000594828 SYN2Q92777 582 aaPredicted RBP23.76■■□□□ 1.39
LSM4-204ENST00000594828 SPTY2D1-AS1A0A0U1RR47 76 aa23.75■■□□□ 1.39
LSM4-204ENST00000594828 TRABD2BA6NFA1 517 aa23.75■■□□□ 1.39
LSM4-204ENST00000594828 MMP20O60882 483 aa23.75■■□□□ 1.39
LSM4-204ENST00000594828 JUPP14923 745 aa23.75■■□□□ 1.39
LSM4-204ENST00000594828 XPAP23025 273 aaPredicted RBP23.75■■□□□ 1.39
LSM4-204ENST00000594828 HCAR3P49019 387 aa23.75■■□□□ 1.39
LSM4-204ENST00000594828 ZNF135P52742 658 aaPredicted RBP23.75■■□□□ 1.39
LSM4-204ENST00000594828 CAMK2BQ13554 666 aa23.75■■□□□ 1.39
LSM4-204ENST00000594828 FZD2Q14332 565 aa23.75■■□□□ 1.39
LSM4-204ENST00000594828 ACAP1Q15027 740 aa23.75■■□□□ 1.39
LSM4-204ENST00000594828 PROX2Q3B8N5 592 aa23.75■■□□□ 1.39
LSM4-204ENST00000594828 VPS36Q86VN1 386 aa23.75■■□□□ 1.39
LSM4-204ENST00000594828 DENND6BQ8NEG7 585 aa23.75■■□□□ 1.39
LSM4-204ENST00000594828 OR4C6Q8NH72 309 aa23.75■■□□□ 1.39
LSM4-204ENST00000594828 HCAR2Q8TDS4 363 aa23.75■■□□□ 1.39
LSM4-204ENST00000594828 CPLX3Q8WVH0 158 aa23.75■■□□□ 1.39
LSM4-204ENST00000594828 NEMP2A6NFY4 417 aa23.74■■□□□ 1.39
LSM4-204ENST00000594828 FFAR2O15552 330 aa23.74■■□□□ 1.39
LSM4-204ENST00000594828 TM7SF2O76062 418 aa23.74■■□□□ 1.39
LSM4-204ENST00000594828 PIGNO95427 931 aa23.74■■□□□ 1.39
LSM4-204ENST00000594828 ITIH2P19823 946 aa23.74■■□□□ 1.39
LSM4-204ENST00000594828 ACP1P24666 158 aa23.74■■□□□ 1.39
LSM4-204ENST00000594828 PCK1P35558 622 aa23.74■■□□□ 1.39
LSM4-204ENST00000594828 HNF1BP35680 557 aa23.74■■□□□ 1.39
LSM4-204ENST00000594828 SUOXP51687 545 aa23.74■■□□□ 1.39
LSM4-204ENST00000594828 HNRNPKP61978 463 aaKnown RBP eCLIP23.74■■□□□ 1.39
LSM4-204ENST00000594828 PDE1CQ14123 709 aaPredicted RBP23.74■■□□□ 1.39
LSM4-204ENST00000594828 AFMIDQ63HM1 303 aa23.74■■□□□ 1.39
LSM4-204ENST00000594828 PDCD7Q8N8D1 485 aaKnown RBP23.74■■□□□ 1.39
LSM4-204ENST00000594828 CXorf40AQ8TE69 158 aa23.74■■□□□ 1.39
LSM4-204ENST00000594828 CENPTQ96BT3 561 aa23.74■■□□□ 1.39
LSM4-204ENST00000594828 SUV39H2Q9H5I1 410 aa23.74■■□□□ 1.39
LSM4-204ENST00000594828 CAAP1Q9H8G2 361 aa23.74■■□□□ 1.39
LSM4-204ENST00000594828 CWC15Q9P013 229 aaKnown RBP23.74■■□□□ 1.39
LSM4-204ENST00000594828 CAPN11Q9UMQ6 739 aa23.74■■□□□ 1.39
LSM4-204ENST00000594828 DFFAO00273 331 aa23.73■■□□□ 1.39
LSM4-204ENST00000594828 PALMO75781 387 aa23.73■■□□□ 1.39
LSM4-204ENST00000594828 CSF2P04141 144 aa23.73■■□□□ 1.39
LSM4-204ENST00000594828 SERPING1P05155 500 aa23.73■■□□□ 1.39
LSM4-204ENST00000594828 CLDN6P56747 220 aa23.73■■□□□ 1.39
LSM4-204ENST00000594828 ZBED6P86452 979 aa23.73■■□□□ 1.39
LSM4-204ENST00000594828 DAB2P98082 770 aa23.73■■□□□ 1.39
LSM4-204ENST00000594828 PARGQ86W56 976 aa23.73■■□□□ 1.39
LSM4-204ENST00000594828 ARHGAP12Q8IWW6 846 aa23.73■■□□□ 1.39
LSM4-204ENST00000594828 IQCDQ96DY2 449 aa23.73■■□□□ 1.39
LSM4-204ENST00000594828 ZNF641Q96N77 438 aaPredicted RBP23.73■■□□□ 1.39
LSM4-204ENST00000594828 WRAP53Q9BUR4 548 aaKnown RBP23.73■■□□□ 1.39
LSM4-204ENST00000594828 C1QTNF7Q9BXJ2 289 aa23.73■■□□□ 1.39
LSM4-204ENST00000594828 ZWILCHQ9H900 591 aa23.73■■□□□ 1.39
LSM4-204ENST00000594828 SP110Q9HB58 689 aa23.73■■□□□ 1.39
LSM4-204ENST00000594828 IGF2RP11717 2491 aa23.73■■□□□ 1.39
LSM4-204ENST00000594828 H3BM21 787 aa23.72■■□□□ 1.39
LSM4-204ENST00000594828 GIMD1P0DJR0 217 aa23.72■■□□□ 1.39
LSM4-204ENST00000594828 ALPPL2P10696 532 aa23.72■■□□□ 1.39
LSM4-204ENST00000594828 NME1P15531 152 aaKnown RBP23.72■■□□□ 1.39
LSM4-204ENST00000594828 PTMSP20962 102 aa23.72■■□□□ 1.39
LSM4-204ENST00000594828 PFN3P60673 137 aa23.72■■□□□ 1.39
LSM4-204ENST00000594828 ELP6Q0PNE2 266 aa23.72■■□□□ 1.39
LSM4-204ENST00000594828 TMEM52BQ4KMG9 183 aa23.72■■□□□ 1.39
LSM4-204ENST00000594828 BOLA3Q53S33 107 aa23.72■■□□□ 1.39
LSM4-204ENST00000594828 LZTR1Q8N653 840 aa23.72■■□□□ 1.39
LSM4-204ENST00000594828 NPWQ8N729 165 aa23.72■■□□□ 1.39
LSM4-204ENST00000594828 TSEN2Q8NCE0 465 aaKnown RBP23.72■■□□□ 1.39
LSM4-204ENST00000594828 NLGN3Q9NZ94 848 aa23.72■■□□□ 1.39
LSM4-204ENST00000594828 DKK4Q9UBT3 224 aa23.72■■□□□ 1.39
LSM4-204ENST00000594828 LUC7L2Q9Y383 392 aaKnown RBP23.72■■□□□ 1.39
LSM4-204ENST00000594828 SCAMP1O15126 338 aa23.71■■□□□ 1.39
LSM4-204ENST00000594828 BUB1BO60566 1050 aaPredicted RBP23.71■■□□□ 1.39
LSM4-204ENST00000594828 IL1R2P27930 398 aa23.71■■□□□ 1.39
LSM4-204ENST00000594828 CSNK1DP48730 415 aa23.71■■□□□ 1.39
LSM4-204ENST00000594828 IL10RBQ08334 325 aa23.71■■□□□ 1.39
LSM4-204ENST00000594828 CYP4F3Q08477 520 aa23.71■■□□□ 1.39
LSM4-204ENST00000594828 DPYSQ14117 519 aa23.71■■□□□ 1.39
LSM4-204ENST00000594828 PIGHQ14442 188 aaPredicted RBP23.71■■□□□ 1.39
LSM4-204ENST00000594828 UGP2Q16851 508 aa23.71■■□□□ 1.39
LSM4-204ENST00000594828 CFAP58Q5T655 872 aa23.71■■□□□ 1.39
LSM4-204ENST00000594828 HES3Q5TGS1 186 aa23.71■■□□□ 1.39
LSM4-204ENST00000594828 SRLQ86TD4 932 aa23.71■■□□□ 1.39
LSM4-204ENST00000594828 CAMK1DQ8IU85 385 aa23.71■■□□□ 1.39
LSM4-204ENST00000594828 TUBGCP5Q96RT8 1024 aa23.71■■□□□ 1.39
LSM4-204ENST00000594828 CINPQ9BW66 212 aaPredicted RBP23.71■■□□□ 1.39
LSM4-204ENST00000594828 THAP2Q9H0W7 228 aa23.71■■□□□ 1.39
LSM4-204ENST00000594828 IFNKQ9P0W0 207 aa23.71■■□□□ 1.39
LSM4-204ENST00000594828 ARID1BQ8NFD5 2236 aaPredicted RBP23.71■■□□□ 1.39
LSM4-204ENST00000594828 TSPAN11A1L157 253 aa23.7■■□□□ 1.38
LSM4-204ENST00000594828 H3BRJ5 948 aa23.7■■□□□ 1.38
LSM4-204ENST00000594828 ARL4AP40617 200 aa23.7■■□□□ 1.38
LSM4-204ENST00000594828 THOP1P52888 689 aa23.7■■□□□ 1.38
LSM4-204ENST00000594828 E2F1Q01094 437 aa23.7■■□□□ 1.38
LSM4-204ENST00000594828 PTK2BQ14289 1009 aa23.7■■□□□ 1.38
LSM4-204ENST00000594828 RFTN1Q14699 578 aaPredicted RBP23.7■■□□□ 1.38
LSM4-204ENST00000594828 NFKBIBQ15653 356 aa23.7■■□□□ 1.38
LSM4-204ENST00000594828 DPYSL2Q16555 572 aa23.7■■□□□ 1.38
LSM4-204ENST00000594828 SMTNL2Q2TAL5 461 aa23.7■■□□□ 1.38
LSM4-204ENST00000594828 TPRG1LQ5T0D9 272 aa23.7■■□□□ 1.38
LSM4-204ENST00000594828 BRAT1Q6PJG6 821 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms