RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 PTCD2Q8WV60 388 aaKnown RBP21.01■□□□□ 0.95
PNKP-203ENST00000593946 TTC17Q96AE7 1141 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 NECTIN4Q96NY8 510 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 PAFAH2Q99487 392 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 TDRD1Q9BXT4 1180 aaKnown RBP21.01■□□□□ 0.95
PNKP-203ENST00000593946 PLA2G2FQ9BZM2 168 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 ECT2Q9H8V3 914 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 CHRAC1Q9NRG0 131 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 BCCIPQ9P287 314 aaKnown RBP eCLIP21.01■□□□□ 0.95
PNKP-203ENST00000593946 SLC25A13Q9UJS0 675 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 SLC27A6Q9Y2P4 619 aa21.01■□□□□ 0.95
PNKP-203ENST00000593946 ARIH1Q9Y4X5 557 aaPredicted RBP21.01■□□□□ 0.95
PNKP-203ENST00000593946 FAM159BA6NKW6 160 aa21■□□□□ 0.95
PNKP-203ENST00000593946 SOX1O00570 391 aaPredicted RBP21■□□□□ 0.95
PNKP-203ENST00000593946 PIAS1O75925 651 aa21■□□□□ 0.95
PNKP-203ENST00000593946 NDST3O95803 873 aa21■□□□□ 0.95
PNKP-203ENST00000593946 FGF1P05230 155 aa21■□□□□ 0.95
PNKP-203ENST00000593946 CSNK1DP48730 415 aa21■□□□□ 0.95
PNKP-203ENST00000593946 DGKGP49619 791 aa21■□□□□ 0.95
PNKP-203ENST00000593946 AP1S1P61966 158 aa21■□□□□ 0.95
PNKP-203ENST00000593946 ECT2LQ008S8 904 aa21■□□□□ 0.95
PNKP-203ENST00000593946 FRG1Q14331 258 aaKnown RBP21■□□□□ 0.95
PNKP-203ENST00000593946 GEN1Q17RS7 908 aa21■□□□□ 0.95
PNKP-203ENST00000593946 ANKRD20A4Q4UJ75 823 aa21■□□□□ 0.95
PNKP-203ENST00000593946 ATXN7L2Q5T6C5 722 aaPredicted RBP21■□□□□ 0.95
PNKP-203ENST00000593946 MBLAC2Q68D91 279 aa21■□□□□ 0.95
PNKP-203ENST00000593946 SRLQ86TD4 932 aa21■□□□□ 0.95
PNKP-203ENST00000593946 ISG20Q96AZ6 181 aaKnown RBP21■□□□□ 0.95
PNKP-203ENST00000593946 ZNF669Q96BR6 464 aaPredicted RBP21■□□□□ 0.95
PNKP-203ENST00000593946 FCRL3Q96P31 734 aaPredicted RBP21■□□□□ 0.95
PNKP-203ENST00000593946 TM6SF2Q9BZW4 377 aa21■□□□□ 0.95
PNKP-203ENST00000593946 MRM3Q9HC36 420 aaKnown RBP21■□□□□ 0.95
PNKP-203ENST00000593946 BPTFQ12830 3046 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 ZCWPW2A0A1B0GU75 182 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 TULP3O75386 442 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 PSMC3P17980 439 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 DGKKQ5KSL6 1271 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 PKN3Q6P5Z2 889 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 PARM1Q6UWI2 310 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 CES3Q6UWW8 571 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 MICALL1Q8N3F8 863 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 SUSD6Q92537 303 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 FGF14Q92915 247 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 MFSD3Q96ES6 412 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 RANBP9Q96S59 729 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 KXD1Q9BQD3 176 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 SMYD2Q9NRG4 433 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 PSMC3IPQ9P2W1 217 aaPredicted RBP20.99■□□□□ 0.95
PNKP-203ENST00000593946 PRKAG3Q9UGI9 489 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 NOVA2Q9UNW9 492 aaKnown RBP20.99■□□□□ 0.95
PNKP-203ENST00000593946 TCAF1Q9Y4C2 921 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 FAM169AQ9Y6X4 670 aa20.99■□□□□ 0.95
PNKP-203ENST00000593946 PRLP01236 227 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 POLR2EP19388 210 aaKnown RBP20.98■□□□□ 0.95
PNKP-203ENST00000593946 ADRA1DP25100 572 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 C22orf39Q6P5X5 142 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 ZNF449Q6P9G9 518 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 ADGRD1Q6QNK2 874 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 UNC5BQ8IZJ1 945 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.98■□□□□ 0.95
PNKP-203ENST00000593946 PPHLN1Q8NEY8 458 aaKnown RBP20.98■□□□□ 0.95
PNKP-203ENST00000593946 WFIKKN2Q8TEU8 576 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 DCAKDQ8WVC6 231 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 SLC44A1Q8WWI5 657 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 ZNF778Q96MU6 729 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 STMN4Q9H169 189 aaPredicted RBP20.98■□□□□ 0.95
PNKP-203ENST00000593946 CHKBQ9Y259 395 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 PCDHGC4Q9Y5F7 938 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 RAI2Q9Y5P3 530 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 UNC80Q8N2C7 3258 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 CXorf49A8MYA2 514 aaPredicted RBP20.98■□□□□ 0.95
PNKP-203ENST00000593946 ECI2O75521 394 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 NMBRP28336 390 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 TRAF2Q12933 501 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 GRM2Q14416 872 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 GALNT3Q14435 633 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 LRRC6Q86X45 466 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 YAF2Q8IY57 180 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 CYP4X1Q8N118 509 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 GAS2L1Q99501 681 aaPredicted RBP20.98■□□□□ 0.95
PNKP-203ENST00000593946 CEP44Q9C0F1 390 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 TBK1Q9UHD2 729 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 CD207Q9UJ71 328 aa20.98■□□□□ 0.95
PNKP-203ENST00000593946 USP15Q9Y4E8 981 aaPredicted RBP20.98■□□□□ 0.95
PNKP-203ENST00000593946 SPTBN5Q9NRC6 3674 aaKnown RBP20.97■□□□□ 0.95
PNKP-203ENST00000593946 HEATR9A2RTY3 570 aa20.97■□□□□ 0.95
PNKP-203ENST00000593946 IGSF6O95976 241 aa20.97■□□□□ 0.95
PNKP-203ENST00000593946 MSH2P43246 934 aa20.97■□□□□ 0.95
PNKP-203ENST00000593946 MAPK8P45983 427 aa20.97■□□□□ 0.95
PNKP-203ENST00000593946 RUNX3Q13761 415 aa20.97■□□□□ 0.95
PNKP-203ENST00000593946 CPA6Q8N4T0 437 aa20.97■□□□□ 0.95
PNKP-203ENST00000593946 OR2AP1Q8NGE2 309 aa20.97■□□□□ 0.95
PNKP-203ENST00000593946 MRRFQ96E11 262 aaKnown RBP20.97■□□□□ 0.95
PNKP-203ENST00000593946 CERS2Q96G23 380 aa20.97■□□□□ 0.95
PNKP-203ENST00000593946 FAM161BQ96MY7 647 aa20.97■□□□□ 0.95
PNKP-203ENST00000593946 TNKS2Q9H2K2 1166 aa20.97■□□□□ 0.95
PNKP-203ENST00000593946 EPS15L1Q9UBC2 864 aa20.97■□□□□ 0.95
PNKP-203ENST00000593946 ERVW-1Q9UQF0 538 aa20.97■□□□□ 0.95
PNKP-203ENST00000593946 MUC22E2RYF6 1773 aaPredicted RBP20.97■□□□□ 0.95
PNKP-203ENST00000593946 TICRRQ7Z2Z1 1910 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms