RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 TASP1Q9H6P5 420 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 MAGEE1Q9HCI5 957 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 FBRSL1Q9HCM7 1045 aaKnown RBP15.32■□□□□ 0.04
CIRBP-228ENST00000590347 SEPT10Q9P0V9 454 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 DCDC2Q9UHG0 476 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 A0A096LPK6 155 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 NEMP2A6NFY4 417 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 KCNK2O95069 426 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 ABCB1P08183 1280 aaPredicted RBP15.32■□□□□ 0.04
CIRBP-228ENST00000590347 KCNA2P16389 499 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 SLC36A3Q495N2 470 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 CAMK1DQ8IU85 385 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 NIM1KQ8IY84 436 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 GPD1LQ8N335 351 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 ZNF641Q96N77 438 aaPredicted RBP15.32■□□□□ 0.04
CIRBP-228ENST00000590347 PSD2Q9BQI7 771 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 EFHD1Q9BUP0 239 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 RSAD1Q9HA92 442 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 PKD2L2Q9NZM6 624 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 TRDMT1O14717 391 aaKnown RBP15.31■□□□□ 0.04
CIRBP-228ENST00000590347 TRIM13O60858 407 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 CCNKO75909 580 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 UBL4AP11441 157 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 CCND2P30279 289 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 RPL14P50914 215 aaKnown RBP15.31■□□□□ 0.04
CIRBP-228ENST00000590347 BCAR1P56945 870 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 NOMO1Q15155 1222 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 GEN1Q17RS7 908 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 REP15Q6BDI9 236 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 ZNF677Q86XU0 584 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 CELF2-AS1Q8N7Q2 184 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 DCAF4Q8WV16 495 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 EGLN2Q96KS0 407 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 TTYH2Q9BSA4 534 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 C2orf40Q9H1Z8 148 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 SPC25Q9HBM1 224 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 CYP4F12Q9HCS2 524 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 SNTG2Q9NY99 539 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 IPO11Q9UI26 975 aaKnown RBP15.31■□□□□ 0.04
CIRBP-228ENST00000590347 INPP4BO15327 924 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 CAPNS1P04632 268 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 KRT7P08729 469 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 IFI30P13284 250 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 GBE1Q04446 702 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 CA9Q16790 459 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 TJAP1Q5JTD0 557 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 LRRC38Q5VT99 294 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 NEK5Q6P3R8 708 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 FRA10AC1Q70Z53 315 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 PAGE2Q7Z2X7 111 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 FAM83FQ8NEG4 500 aaPredicted RBP15.31■□□□□ 0.04
CIRBP-228ENST00000590347 CMASQ8NFW8 434 aaPredicted RBP15.31■□□□□ 0.04
CIRBP-228ENST00000590347 NACC2Q96BF6 587 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 TDRD1Q9BXT4 1180 aaKnown RBP15.31■□□□□ 0.04
CIRBP-228ENST00000590347 PRRG3Q9BZD7 231 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 NGRNQ9NPE2 291 aaKnown RBP15.31■□□□□ 0.04
CIRBP-228ENST00000590347 PAK5Q9P286 719 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 USP22Q9UPT9 525 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 PCDHA11Q9Y5I1 949 aa15.31■□□□□ 0.04
CIRBP-228ENST00000590347 WNT10BO00744 389 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 AP3D1O14617 1153 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 PAPSS1O43252 624 aaPredicted RBP15.3■□□□□ 0.04
CIRBP-228ENST00000590347 SCO1O75880 301 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 FOSP01100 380 aaPredicted RBP15.3■□□□□ 0.04
CIRBP-228ENST00000590347 LRPAP1P30533 357 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 MLLT3P42568 568 aaPredicted RBP15.3■□□□□ 0.04
CIRBP-228ENST00000590347 SERPINB9P50453 376 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 ZNF135P52742 658 aaPredicted RBP15.3■□□□□ 0.04
CIRBP-228ENST00000590347 PLK1P53350 603 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 XAF1Q6GPH4 301 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 CYP2U1Q7Z449 544 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 R3HCC1LQ7Z5L2 792 aaKnown RBP15.3■□□□□ 0.04
CIRBP-228ENST00000590347 ZNF354CQ86Y25 554 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 ELMOD2Q8IZ81 293 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 PNPLA1Q8N8W4 532 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 HMGCLL1Q8TB92 370 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 HDAC10Q969S8 669 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 ITCHQ96J02 903 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 MFSD14AQ96MC6 490 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 NECTIN4Q96NY8 510 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 CPXM1Q96SM3 734 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 UPF3AQ9H1J1 476 aaKnown RBP15.3■□□□□ 0.04
CIRBP-228ENST00000590347 MKS1Q9NXB0 559 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 CACNA2D2Q9NY47 1150 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 MRASO14807 208 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 CLASP2O75122 1294 aaKnown RBP15.3■□□□□ 0.04
CIRBP-228ENST00000590347 GCATO75600 419 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 CALB1P05937 261 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 PTPN2P17706 415 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 ITGB5P18084 799 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 TPD52P55327 224 aaPredicted RBP15.3■□□□□ 0.04
CIRBP-228ENST00000590347 TRIM32Q13049 653 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 CYBRD1Q53TN4 286 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 ERMP1Q7Z2K6 904 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 ADCK1Q86TW2 530 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 OSTM1Q86WC4 334 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 ATL1Q8WXF7 558 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 CERS2Q96G23 380 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 APOL2Q9BQE5 337 aa15.3■□□□□ 0.04
CIRBP-228ENST00000590347 BEX2Q9BXY8 128 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms