RNA–Protein interactions for RNA: ENST00000589872.1

NBR1-205, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NBR1, Length 3,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-205ENST00000589872 IFNLR1Q8IU57 520 aaPredicted RBP12.48□□□□□ -0.41
NBR1-205ENST00000589872 ARL10Q8N8L6 244 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 DNAAF3Q8N9W5 541 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 ANKRD52Q8NB46 1076 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 CPB2Q96IY4 423 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 UPF3AQ9H1J1 476 aaKnown RBP12.48□□□□□ -0.41
NBR1-205ENST00000589872 PRDM12Q9H4Q4 367 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 RPAP3Q9H6T3 665 aaPredicted RBP12.48□□□□□ -0.41
NBR1-205ENST00000589872 CCM2LQ9NUG4 571 aaPredicted RBP12.48□□□□□ -0.41
NBR1-205ENST00000589872 MID2Q9UJV3 735 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 SLC27A5Q9Y2P5 690 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 EI24O14681 340 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 ACOX3O15254 700 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 TIMM44O43615 452 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 IDUAP35475 653 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 IREB2P48200 963 aaKnown RBP12.48□□□□□ -0.41
NBR1-205ENST00000589872 SOWAHAQ2M3V2 549 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 ANO4Q32M45 955 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 ATF7IP2Q5U623 682 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 TMEM214Q6NUQ4 689 aaKnown RBP12.48□□□□□ -0.41
NBR1-205ENST00000589872 FAM131BQ86XD5 332 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 ZNF354CQ86Y25 554 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 NT5DC4Q86YG4 428 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 SCAIQ8N9R8 606 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 TXNDC5Q8NBS9 432 aaKnown RBP12.48□□□□□ -0.41
NBR1-205ENST00000589872 RDH11Q8TC12 318 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 FTHL17Q9BXU8 183 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 TRIM8Q9BZR9 551 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 PTPRHQ9HD43 1115 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 GIN1Q9NXP7 522 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 ST14Q9Y5Y6 855 aa12.48□□□□□ -0.41
NBR1-205ENST00000589872 ZNF487B1APH4 448 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 UBDO15205 165 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 ESRRBO95718 433 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 BCL10O95999 233 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 PGK1P00558 417 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 APOA4P06727 396 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 SNRPB2P08579 225 aaKnown RBP12.47□□□□□ -0.41
NBR1-205ENST00000589872 NMBRP28336 390 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 TTKP33981 857 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 EFNA5P52803 228 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 PERM1Q5SV97 790 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 C8orf82Q6P1X6 216 aaPredicted RBP12.47□□□□□ -0.41
NBR1-205ENST00000589872 ABRAXAS1Q6UWZ7 409 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 CCDC80Q76M96 950 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 BPIFB6Q8NFQ5 453 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 DNAI2Q9GZS0 605 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 CDT1Q9H211 546 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 RPF1Q9H9Y2 349 aaKnown RBP12.47□□□□□ -0.41
NBR1-205ENST00000589872 FANCEQ9HB96 536 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 PALMDQ9NP74 551 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 AGPAT4Q9NRZ5 378 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 DAPK2Q9UIK4 370 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 SLC30A1Q9Y6M5 507 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 HACD1B0YJ81 288 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 NME4O00746 187 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 NRP2O60462 931 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 NCAM1P13591 858 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 NR4A1P22736 598 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 PTPN9P43378 593 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 PPIL2Q13356 520 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 ATP6AP1Q15904 470 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 RETREG3Q86VR2 466 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 ZC3HC1Q86WB0 502 aaKnown RBP12.47□□□□□ -0.41
NBR1-205ENST00000589872 CEP97Q8IW35 865 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 CADM3Q8N126 398 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 PACRGLQ8N7B6 248 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 PCYOX1LQ8NBM8 494 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 OR13F1Q8NGS4 319 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 SNX19Q92543 992 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 HPDLQ96IR7 371 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 SNX27Q96L92 541 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 MPHOSPH6Q99547 160 aaKnown RBP12.47□□□□□ -0.41
NBR1-205ENST00000589872 GPR22Q99680 433 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 C11orf84Q9BUA3 381 aaPredicted RBP12.47□□□□□ -0.41
NBR1-205ENST00000589872 TDRD1Q9BXT4 1180 aaKnown RBP12.47□□□□□ -0.41
NBR1-205ENST00000589872 VRTNQ9H8Y1 702 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 FBRSL1Q9HCM7 1045 aaKnown RBP12.47□□□□□ -0.41
NBR1-205ENST00000589872 GPRC5DQ9NZD1 345 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 BFARQ9NZS9 450 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 ITGB1BP2Q9UKP3 347 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 CPQQ9Y646 472 aa12.47□□□□□ -0.41
NBR1-205ENST00000589872 DHRS12A0PJE2 317 aa12.46□□□□□ -0.41
NBR1-205ENST00000589872 TRPC5OSA6NMA1 111 aa12.46□□□□□ -0.41
NBR1-205ENST00000589872 MAFO75444 373 aaPredicted RBP12.46□□□□□ -0.41
NBR1-205ENST00000589872 TOMM70O94826 608 aa12.46□□□□□ -0.41
NBR1-205ENST00000589872 JAK1P23458 1154 aa12.46□□□□□ -0.41
NBR1-205ENST00000589872 YWHAQP27348 245 aa12.46□□□□□ -0.41
NBR1-205ENST00000589872 ELK4P28324 431 aa12.46□□□□□ -0.41
NBR1-205ENST00000589872 RCVRNP35243 200 aa12.46□□□□□ -0.41
NBR1-205ENST00000589872 SOX11P35716 441 aa12.46□□□□□ -0.41
NBR1-205ENST00000589872 OPRL1P41146 370 aa12.46□□□□□ -0.41
NBR1-205ENST00000589872 CSE1LP55060 971 aaKnown RBP12.46□□□□□ -0.41
NBR1-205ENST00000589872 GRSF1Q12849 480 aaKnown RBP eCLIP12.46□□□□□ -0.41
NBR1-205ENST00000589872 SQLEQ14534 574 aa12.46□□□□□ -0.41
NBR1-205ENST00000589872 ZNF280DQ6N043 979 aa12.46□□□□□ -0.41
NBR1-205ENST00000589872 ACOT1Q86TX2 421 aa12.46□□□□□ -0.41
NBR1-205ENST00000589872 MFSD6LQ8IWD5 586 aa12.46□□□□□ -0.41
NBR1-205ENST00000589872 SEPT8Q92599 483 aa12.46□□□□□ -0.41
NBR1-205ENST00000589872 SGCDQ92629 289 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms