RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 TBC1D3EA0A087X179 549 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 TBC1D3KA0A087X1G2 549 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 TBC1D3BA6NDS4 549 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 TBC1D3FA6NER0 549 aaPredicted RBP3.06□□□□□ -1.92
VAPA-208ENST00000584796 MBD3L5A6NJ08 208 aaPredicted RBP3.06□□□□□ -1.92
VAPA-208ENST00000584796 SLC38A8A6NNN8 435 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 KIF28PB7ZC32 967 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 TBC1D3LB9A6J9 549 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 ASAP2O43150 1006 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 KCNJ13O60928 360 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 TBC1D3HP0C7X1 549 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 TNFSF4P23510 183 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 KLRC2P26717 231 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 COL4A5P29400 1685 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 PPP3CCP48454 512 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 ALDH18A1P54886 795 aaKnown RBP3.06□□□□□ -1.92
VAPA-208ENST00000584796 TUBA1BP68363 451 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 BNC1Q01954 994 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 ZNF831Q5JPB2 1677 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 FAM209BQ5JX69 171 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 ATG9BQ674R7 924 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 TBC1D3GQ6DHY5 549 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 TBC1D3CQ6IPX1 549 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 HEPHL1Q6MZM0 1159 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 TMEM200AQ86VY9 491 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 TBC1D3Q8IZP1 549 aaPredicted RBP3.06□□□□□ -1.92
VAPA-208ENST00000584796 ENDOVQ8N8Q3 282 aaKnown RBP3.06□□□□□ -1.92
VAPA-208ENST00000584796 TMEM163Q8TC26 289 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 TMED6Q8WW62 240 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 LTV1Q96GA3 475 aaPredicted RBP3.06□□□□□ -1.92
VAPA-208ENST00000584796 ZNF333Q96JL9 665 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 INPP4AQ96PE3 977 aaPredicted RBP3.06□□□□□ -1.92
VAPA-208ENST00000584796 PKP4Q99569 1192 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 MECRQ9BV79 373 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 SARGQ9BW04 601 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 TMEM120AQ9BXJ8 343 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 NAA15Q9BXJ9 866 aaKnown RBP3.06□□□□□ -1.92
VAPA-208ENST00000584796 NSD3Q9BZ95 1437 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 SPRY4Q9C004 299 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 HIPK3Q9H422 1215 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 Q9N2J8 555 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 ARL15Q9NXU5 204 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 ANKRD26Q9UPS8 1709 aa3.06□□□□□ -1.92
VAPA-208ENST00000584796 SCN4AP35499 1836 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 LAMB4A4D0S4 1761 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 KDM3BQ7LBC6 1761 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 CNTNAP1P78357 1384 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 CARMIL3Q8ND23 1372 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 PALLDQ8WX93 1383 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 IGLV5-52A0A0A0MRZ9 124 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.05□□□□□ -1.92
VAPA-208ENST00000584796 TCRBV7S3A2A0A539 114 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 SOCS5O75159 536 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 LARGE1O95461 756 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 CGAP01215 116 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 MMP10P09238 476 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 HOXB9P17482 250 aaPredicted RBP3.05□□□□□ -1.92
VAPA-208ENST00000584796 THPOP40225 353 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 TM4SF4P48230 202 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 HSPA7P48741 367 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 TMPRSS3P57727 454 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 DDR1Q08345 913 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 GRSF1Q12849 480 aaKnown RBP eCLIP3.05□□□□□ -1.92
VAPA-208ENST00000584796 MPEG1Q2M385 716 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 COBLL1Q53SF7 1204 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 CCDC181Q5TID7 509 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 RINT1Q6NUQ1 792 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 CERS3Q8IU89 383 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 WDR75Q8IWA0 830 aaKnown RBP3.05□□□□□ -1.92
VAPA-208ENST00000584796 NRSN1Q8IZ57 195 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 HORMAD2Q8N7B1 307 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 SLC35F5Q8WV83 523 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 IGSF21Q96ID5 467 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 TP63Q9H3D4 680 aaPredicted RBP3.05□□□□□ -1.92
VAPA-208ENST00000584796 FAM50BQ9Y247 325 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 RAP2CQ9Y3L5 183 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 BCORQ6W2J9 1755 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 PAPPA2Q9BXP8 1791 aa3.05□□□□□ -1.92
VAPA-208ENST00000584796 UNC80Q8N2C7 3258 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 KDRP35968 1356 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 PLEKHG2Q9H7P9 1386 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 AKAP11Q9UKA4 1901 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 IGHV4-28A0A0C4DH34 117 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 RASA4BC9J798 803 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 PMM2O15305 246 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 RASA4O43374 803 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 BUB3O43684 328 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 PLA2G6O60733 806 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 TMCC1O94876 653 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 IGLV2-11P01706 119 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 SP1P08047 785 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 F7P08709 466 aaPredicted RBP3.04□□□□□ -1.92
VAPA-208ENST00000584796 DAOP14920 347 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 NAGAP17050 411 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 CYP2J2P51589 502 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 OAZ1P54368 228 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 SF3A3Q12874 501 aaKnown RBP eCLIP3.04□□□□□ -1.922e-20■■■■□ 20.6
VAPA-208ENST00000584796 SAFBQ15424 915 aaKnown RBP eCLIP3.04□□□□□ -1.92
VAPA-208ENST00000584796 MRGPRG-AS1Q2M3A8 158 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 TRIM60Q495X7 471 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms