RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 FAM129BQ96TA1 746 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 RSPH9Q9H1X1 276 aaPredicted RBP18.5■□□□□ 0.55
RFFL-211ENST00000584541 SUV39H2Q9H5I1 410 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 LRRC40Q9H9A6 602 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 DYRK4Q9NR20 520 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 TPX2Q9ULW0 747 aaKnown RBP18.5■□□□□ 0.55
RFFL-211ENST00000584541 ARIH1Q9Y4X5 557 aaPredicted RBP18.5■□□□□ 0.55
RFFL-211ENST00000584541 PCDHGC4Q9Y5F7 938 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 RAI2Q9Y5P3 530 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 WASF2Q9Y6W5 498 aa18.5■□□□□ 0.55
RFFL-211ENST00000584541 KPNA3O00505 521 aaPredicted RBP18.49■□□□□ 0.55
RFFL-211ENST00000584541 DNALI1O14645 258 aaPredicted RBP18.49■□□□□ 0.55
RFFL-211ENST00000584541 PIGNO95427 931 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 PDGFBP01127 241 aaPredicted RBP18.49■□□□□ 0.55
RFFL-211ENST00000584541 UGT2B4P06133 528 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 APRTP07741 180 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 AOC1P19801 751 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 COL9A1P20849 921 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 CLCN5P51795 746 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 TERF1P54274 439 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 WNT3AP56704 352 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 SLC7A5Q01650 507 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 CALCOCO2Q13137 446 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 KCTD19Q17RG1 926 aaPredicted RBP18.49■□□□□ 0.55
RFFL-211ENST00000584541 ARMC12Q5T9G4 340 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 IZUMO3Q5VZ72 239 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 CAMK1DQ8IU85 385 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 MMAAQ8IVH4 418 aaKnown RBP18.49■□□□□ 0.55
RFFL-211ENST00000584541 PPIL6Q8IXY8 311 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 PDCD7Q8N8D1 485 aaKnown RBP18.49■□□□□ 0.55
RFFL-211ENST00000584541 LRRN4CLQ8ND94 238 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 PIP4K2CQ8TBX8 421 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 PDCD6IPQ8WUM4 868 aaKnown RBP18.49■□□□□ 0.55
RFFL-211ENST00000584541 MLPHQ9BV36 600 aaPredicted RBP18.49■□□□□ 0.55
RFFL-211ENST00000584541 TDRD1Q9BXT4 1180 aaKnown RBP18.49■□□□□ 0.55
RFFL-211ENST00000584541 ADGRE3Q9BY15 652 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 DPH5Q9H2P9 285 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 EIF2B3Q9NR50 452 aaKnown RBP18.49■□□□□ 0.55
RFFL-211ENST00000584541 PPM1HQ9ULR3 514 aa18.49■□□□□ 0.55
RFFL-211ENST00000584541 TCRBV21S2A2A0A5A6 115 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 ALDH1A2O94788 518 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 AP2A1O95782 977 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 ADH1BP00325 375 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 CTSLP07711 333 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 TPSB2P20231 275 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 PSMD8P48556 350 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 SARNPP82979 210 aaKnown RBP18.48■□□□□ 0.55
RFFL-211ENST00000584541 CDK16Q00536 496 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 SATB1Q01826 763 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 GUCY2DQ02846 1103 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 CDK18Q07002 472 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 TRAF2Q12933 501 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 GAS6Q14393 721 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 TPSAB1Q15661 275 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 ZNF805Q5CZA5 627 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 DUPD1Q68J44 220 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 NAPEPLDQ6IQ20 393 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 KDELC1Q6UW63 502 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 TMEM92Q6UXU6 159 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 LINC00523Q86TU6 105 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 TMPRSS6Q8IU80 811 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 KLHDC8BQ8IXV7 354 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 NDUFAF2Q8N183 169 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 HCAR2Q8TDS4 363 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 PRCCQ92733 491 aaPredicted RBP18.48■□□□□ 0.55
RFFL-211ENST00000584541 FEM1CQ96JP0 617 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 KLHL32Q96NJ5 620 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 GORASP1Q9BQQ3 440 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 SNX24Q9Y343 169 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 TECTAO75443 2155 aa18.48■□□□□ 0.55
RFFL-211ENST00000584541 SMAPO00193 183 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 HTRA2O43464 458 aaPredicted RBP18.47■□□□□ 0.55
RFFL-211ENST00000584541 CPP00450 1065 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 EPOP01588 193 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 DNTTP04053 509 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 RHOXF2BP0C7M4 288 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 ITIH2P19823 946 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 C5AR1P21730 350 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 NFKBIAP25963 317 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 RPL21P46778 160 aaKnown RBP18.47■□□□□ 0.55
RFFL-211ENST00000584541 COPAP53621 1224 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 EPHB1P54762 984 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 DRG2P55039 364 aaKnown RBP18.47■□□□□ 0.55
RFFL-211ENST00000584541 POLR2LP62875 67 aaKnown RBP18.47■□□□□ 0.55
RFFL-211ENST00000584541 CCDC15Q0P6D6 951 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 SFSWAPQ12872 951 aaKnown RBP18.47■□□□□ 0.55
RFFL-211ENST00000584541 CST6Q15828 149 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 SYCP2LQ5T4T6 812 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 KCTD11Q693B1 232 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 BRAT1Q6PJG6 821 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 PPP1R21Q6ZMI0 780 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 KDELC2Q7Z4H8 507 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 TSTD1Q8NFU3 115 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 CPT1BQ92523 772 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 UBXN4Q92575 508 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 PBXIP1Q96AQ6 731 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 MRGPRX2Q96LB1 330 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 NSMCE3Q96MG7 304 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 TBL1YQ9BQ87 522 aa18.47■□□□□ 0.55
RFFL-211ENST00000584541 RHOXF2Q9BQY4 288 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms