RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 OR7D4Q8NG98 312 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 OR2A12Q8NGT7 310 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 SLC30A5Q8TAD4 765 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 SAP25Q8TEE9 199 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 RXFP2Q8WXD0 754 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 CCDC97Q96F63 343 aaPredicted RBP11.34□□□□□ -0.59
CCDC47-206ENST00000584112 PPP1R16AQ96I34 528 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 SPON2Q9BUD6 331 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 SELENOOQ9BVL4 669 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 CEP44Q9C0F1 390 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 NAT10Q9H0A0 1025 aaKnown RBP11.34□□□□□ -0.59
CCDC47-206ENST00000584112 ATP13A1Q9HD20 1204 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 SEPT11Q9NVA2 429 aaKnown RBP11.34□□□□□ -0.59
CCDC47-206ENST00000584112 ADAM22Q9P0K1 906 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 OR12D3Q9UGF7 316 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 PCSK5Q92824 1860 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 A0A1W2PR77 199 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 ANKRD62A6NC57 917 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 TLR4O00206 839 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 KPNA3O00505 521 aaPredicted RBP11.33□□□□□ -0.6
CCDC47-206ENST00000584112 SMAD6O43541 496 aaKnown RBP11.33□□□□□ -0.6
CCDC47-206ENST00000584112 RNGTTO60942 597 aaKnown RBP11.33□□□□□ -0.6
CCDC47-206ENST00000584112 WNT1P04628 370 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 CKMT2P17540 419 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 DESP17661 470 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 GNLYP22749 145 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 RBMS1P29558 406 aaKnown RBP11.33□□□□□ -0.6
CCDC47-206ENST00000584112 MAT2AP31153 395 aaKnown RBP11.33□□□□□ -0.6
CCDC47-206ENST00000584112 ADRA1BP35368 520 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 MAPKAPK2P49137 400 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 SERPINH1P50454 418 aaKnown RBP11.33□□□□□ -0.6
CCDC47-206ENST00000584112 METAP1P53582 386 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 GEMIN4P57678 1058 aaKnown RBP11.33□□□□□ -0.6
CCDC47-206ENST00000584112 GNA12Q03113 381 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 STAT4Q14765 748 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 TGIF1Q15583 401 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 CLEC16AQ2KHT3 1053 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 C15orf59Q2T9L4 293 aaPredicted RBP11.33□□□□□ -0.6
CCDC47-206ENST00000584112 POM121L1PQ3SYA9 428 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 CCDC14Q49A88 953 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 CDCP2Q5VXM1 449 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 RWDD4Q6NW29 188 aaKnown RBP11.33□□□□□ -0.6
CCDC47-206ENST00000584112 ATCAYQ86WG3 371 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 PHF13Q86YI8 300 aaPredicted RBP11.33□□□□□ -0.6
CCDC47-206ENST00000584112 DRC7Q8IY82 874 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 PCDH20Q8N6Y1 951 aaKnown RBP11.33□□□□□ -0.6
CCDC47-206ENST00000584112 C3orf20Q8ND61 904 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 SLC46A1Q96NT5 459 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 FUCA2Q9BTY2 467 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 OSBPL2Q9H1P3 480 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 ERVMER34-1Q9H9K5 563 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.33□□□□□ -0.6
CCDC47-206ENST00000584112 ARHGAP20Q9P2F6 1191 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 ZNF212Q9UDV6 495 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 IL36AQ9UHA7 158 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 ANAPC2Q9UJX6 822 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 ITGB1BP2Q9UKP3 347 aa11.33□□□□□ -0.6
CCDC47-206ENST00000584112 PRAMEF26H0Y7S4 382 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 K7ERQ8 282 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 ZMPSTE24O75844 475 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 CTSLP07711 333 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 KRT7P08729 469 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 FERP16591 822 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 RHOQP17081 205 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 GPD1P21695 349 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 NXPH1P58417 271 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 TYRO3Q06418 890 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 PTP4A2Q12974 167 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 PIP5KL1Q5T9C9 394 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 MANEALQ5VSG8 457 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 PPP1R2P3Q6NXS1 205 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 LINGO4Q6UY18 593 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 KANSL1Q7Z3B3 1105 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 PHLDB2Q86SQ0 1253 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 AOPEPQ8N6M6 819 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 JOSD2Q8TAC2 188 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 GRIN3AQ8TCU5 1115 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 FAM172AQ8WUF8 416 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 HTR3CQ8WXA8 447 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 CENPIQ92674 756 aaPredicted RBP11.32□□□□□ -0.6
CCDC47-206ENST00000584112 NTAN1Q96AB6 310 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 ISG20Q96AZ6 181 aaKnown RBP11.32□□□□□ -0.6
CCDC47-206ENST00000584112 TBC1D31Q96DN5 1066 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 PRR11Q96HE9 360 aaPredicted RBP11.32□□□□□ -0.6
CCDC47-206ENST00000584112 PCDHB18PQ96TA0 734 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 AGPAT1Q99943 283 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 HDAC8Q9BY41 377 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 TNKS2Q9H2K2 1166 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 TMEM248Q9NWD8 314 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 HPCAL4Q9UM19 191 aa11.32□□□□□ -0.6
CCDC47-206ENST00000584112 SIGLEC16A6NMB1 481 aa11.31□□□□□ -0.6
CCDC47-206ENST00000584112 SMTNL1A8MU46 457 aa11.31□□□□□ -0.6
CCDC47-206ENST00000584112 WNT9AO14904 365 aa11.31□□□□□ -0.6
CCDC47-206ENST00000584112 PLEKP08567 350 aaPredicted RBP11.31□□□□□ -0.6
CCDC47-206ENST00000584112 EPHA8P29322 1005 aaPredicted RBP11.31□□□□□ -0.6
CCDC47-206ENST00000584112 RFC1P35251 1148 aaPredicted RBP11.31□□□□□ -0.6
CCDC47-206ENST00000584112 RXRGP48443 463 aa11.31□□□□□ -0.6
CCDC47-206ENST00000584112 DUSP3P51452 185 aaPredicted RBP11.31□□□□□ -0.6
CCDC47-206ENST00000584112 NEK3P51956 506 aa11.31□□□□□ -0.6
CCDC47-206ENST00000584112 HDAC4P56524 1084 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms