RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 IFT81Q8WYA0 676 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 RUBCNQ92622 972 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 VOPP1Q96AW1 172 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SHDQ96IW2 340 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 MTG2Q9H4K7 406 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 EIF2B3Q9NR50 452 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 EVLQ9UI08 416 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 STON1Q9Y6Q2 735 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 EDDM13A0A1B0GTR0 161 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 GOLGA6CA6NDK9 693 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 GOLGA6BA6NDN3 693 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ERI2A8K979 691 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SMAPO00193 183 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PMPCBO75439 489 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SUN1O94901 812 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 AP2A1O95782 977 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 APRTP07741 180 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SERPINF2P08697 491 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 GOLGA6DP0CG33 693 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CHRNB1P11230 501 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 HLA-EP13747 358 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PRKCHP24723 683 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 MAPK8P45983 427 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 RECQLP46063 649 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 LMAN1P49257 510 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CARSP49589 748 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PLTPP55058 493 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 WNT3AP56704 352 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 AP1S1P61966 158 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CDK16Q00536 496 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CAV1Q03135 178 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CALCOCO2Q13137 446 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CUL1Q13616 776 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 C2orf27AQ580R0 203 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SYCP2LQ5T4T6 812 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 C9orf64Q5T6V5 341 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ZDHHC24Q6UX98 284 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SERPINA13PQ6UXR4 307 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CCNI2Q6ZMN8 369 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 RYBPQ8N488 228 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ZNF366Q8N895 744 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CHST14Q8NCH0 376 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 MCUQ8NE86 351 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PRCCQ92733 491 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 MRGPRX2Q96LB1 330 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PARD6BQ9BYG5 372 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CPEB1Q9BZB8 566 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ZDHHC4Q9NPG8 344 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CACNA2D2Q9NY47 1150 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 GOLGA6AQ9NYA3 693 aa16.53■□□□□ 0.24
CDK5RAP3-228ENST00000583363 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 LOC285095A0A1B0GVY8 99 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 BNIP3LO60238 219 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 NTSR1P30989 418 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 GKP32189 559 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ADRA1AP35348 466 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CCNHP51946 323 aaPredicted RBP16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 RAD51Q06609 339 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SPARCL1Q14515 664 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 WDR93Q6P2C0 686 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 RANBP10Q6VN20 620 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CHPFQ8IZ52 775 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 EIF1ADQ8N9N8 165 aaKnown RBP16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 OR6K2Q8NGY2 324 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 NELL2Q99435 816 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 HEPHQ9BQS7 1158 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 FAM129AQ9BZQ8 928 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 LRRC40Q9H9A6 602 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PRSS16Q9NQE7 514 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ZDHHC18Q9NUE0 388 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 NDRG2Q9UN36 371 aaKnown RBP16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 MRPS17Q9Y2R5 130 aaKnown RBP16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PCDHGC4Q9Y5F7 938 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 RAI2Q9Y5P3 530 aa16.52■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ZNF292O60281 2723 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ATG2BQ96BY7 2078 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 KANSL1LA0AUZ9 987 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 SIN3BO75182 1162 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 TMEM63AO94886 807 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 AGTP01019 485 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 EPOP01588 193 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 EPHX1P07099 455 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 TUBBP07437 444 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 TNFRSF8P28908 595 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ECHS1P30084 290 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 WASP42768 502 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ID4P47928 161 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 FZD5Q13467 585 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 GRM3Q14832 879 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ELF2Q15723 593 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 SDE2Q6IQ49 451 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 TRMT11Q7Z4G4 463 aaKnown RBP16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 CAMK1DQ8IU85 385 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 STK40Q8N2I9 435 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 SYNPOQ8N3V7 929 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 IL17RCQ8NAC3 791 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 IPMKQ8NFU5 416 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 FBXO25Q8TCJ0 367 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 TUBGCP5Q96RT8 1024 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 FAM129BQ96TA1 746 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms