RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 CST6Q15828 149 aa14.43□□□□□ -0.1
SKA2-205ENST00000580541 CWF19L1Q69YN2 538 aaKnown RBP14.43□□□□□ -0.1
SKA2-205ENST00000580541 NAPEPLDQ6IQ20 393 aa14.43□□□□□ -0.1
SKA2-205ENST00000580541 KBTBD6Q86V97 674 aa14.43□□□□□ -0.1
SKA2-205ENST00000580541 JAMLQ86YT9 394 aa14.43□□□□□ -0.1
SKA2-205ENST00000580541 MMAAQ8IVH4 418 aaKnown RBP14.43□□□□□ -0.1
SKA2-205ENST00000580541 RBM15Q96T37 977 aaKnown RBP eCLIP14.43□□□□□ -0.1
SKA2-205ENST00000580541 OMDQ99983 421 aa14.43□□□□□ -0.1
SKA2-205ENST00000580541 LRRC40Q9H9A6 602 aa14.43□□□□□ -0.1
SKA2-205ENST00000580541 ETNK1Q9HBU6 452 aa14.43□□□□□ -0.1
SKA2-205ENST00000580541 SPATA6Q9NWH7 488 aaPredicted RBP14.43□□□□□ -0.1
SKA2-205ENST00000580541 RAI2Q9Y5P3 530 aa14.43□□□□□ -0.1
SKA2-205ENST00000580541 TTC28Q96AY4 2481 aa14.43□□□□□ -0.1
SKA2-205ENST00000580541 EFCAB8A8MWE9 144 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 TTI1O43156 1089 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 LAMTOR5O43504 91 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 ZNF217O75362 1048 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 PMPCBO75439 489 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 PAPSS2O95340 614 aaPredicted RBP14.42□□□□□ -0.1
SKA2-205ENST00000580541 SLU7O95391 586 aaKnown RBP14.42□□□□□ -0.1
SKA2-205ENST00000580541 UGT2B4P06133 528 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 ZSCAN5DPP0CG00 497 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 C7P10643 843 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 ETS1P14921 441 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 ITGB7P26010 798 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 SLC8A1P32418 973 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 RGRP47804 291 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 NUBP1P53384 320 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 SKOR1P84550 965 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 CDK18Q07002 472 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 NIPAL4Q0D2K0 466 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 CALCOCO2Q13137 446 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 SEMA5AQ13591 1074 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 TRIP13Q15645 432 aaPredicted RBP14.42□□□□□ -0.1
SKA2-205ENST00000580541 KIAA1211LQ6NV74 962 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 FBXL19Q6PCT2 694 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 TMEM92Q6UXU6 159 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 TTC7BQ86TV6 843 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 PRPF39Q86UA1 669 aaKnown RBP14.42□□□□□ -0.1
SKA2-205ENST00000580541 CAMK1DQ8IU85 385 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 CHST14Q8NCH0 376 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 OR6K2Q8NGY2 324 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 GRIN3AQ8TCU5 1115 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 GANCQ8TET4 914 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 PDCD6IPQ8WUM4 868 aaKnown RBP14.42□□□□□ -0.1
SKA2-205ENST00000580541 RAB7BQ96AH8 199 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 FEM1CQ96JP0 617 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 ERP44Q9BS26 406 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 MTG2Q9H4K7 406 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 EIF2B3Q9NR50 452 aaKnown RBP14.42□□□□□ -0.1
SKA2-205ENST00000580541 TPX2Q9ULW0 747 aaKnown RBP14.42□□□□□ -0.1
SKA2-205ENST00000580541 PHTF1Q9UMS5 762 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 NEU2Q9Y3R4 380 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 PCDHGC4Q9Y5F7 938 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 WASF2Q9Y6W5 498 aa14.42□□□□□ -0.1
SKA2-205ENST00000580541 HTRA2O43464 458 aaPredicted RBP14.41□□□□□ -0.1
SKA2-205ENST00000580541 RAD51CO43502 376 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 PI15O43692 258 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 METTL18O95568 372 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 AP2A1O95782 977 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 MT-CYBP00156 380 aaPredicted RBP14.41□□□□□ -0.1
SKA2-205ENST00000580541 PDGFBP01127 241 aaPredicted RBP14.41□□□□□ -0.1
SKA2-205ENST00000580541 APRTP07741 180 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 ITIH2P19823 946 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 HLA-DPA1P20036 260 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 OXTRP30559 389 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 HOXA6P31267 233 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 PSMD8P48556 350 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 VPS41P49754 854 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 NRLP54845 237 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 DRG2P55039 364 aaKnown RBP14.41□□□□□ -0.1
SKA2-205ENST00000580541 WNT3AP56704 352 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 RPS14P62263 151 aaKnown RBP14.41□□□□□ -0.1
SKA2-205ENST00000580541 GAS6Q14393 721 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 ERAP2Q6P179 960 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 PPP1R21Q6ZMI0 780 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 USP30Q70CQ3 517 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 PPIL6Q8IXY8 311 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 IPMKQ8NFU5 416 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 SPATA22Q8NHS9 363 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 HMGB4Q8WW32 186 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 SPOCK2Q92563 424 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 TADA1Q96BN2 335 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 SNF8Q96H20 258 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 ZNF419Q96HQ0 510 aaPredicted RBP14.41□□□□□ -0.1
SKA2-205ENST00000580541 MRGPRX1Q96LB2 322 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 KLHL32Q96NJ5 620 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 C1QTNF1Q9BXJ1 281 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 COL25A1Q9BXS0 654 aaPredicted RBP14.41□□□□□ -0.1
SKA2-205ENST00000580541 HDAC8Q9BY41 377 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 FRMD8Q9BZ67 464 aaPredicted RBP14.41□□□□□ -0.1
SKA2-205ENST00000580541 EPHX3Q9H6B9 360 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 DLGAP2Q9P1A6 1054 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 EBF1Q9UH73 591 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 PCDHB9Q9Y5E1 797 aa14.41□□□□□ -0.1
SKA2-205ENST00000580541 CCDC163A0A0D9SF12 145 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 TTC24A2A3L6 582 aaPredicted RBP14.4□□□□□ -0.1
SKA2-205ENST00000580541 ANTXRLA6NF34 631 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 C16orf96A6NNT2 1141 aa14.4□□□□□ -0.1
SKA2-205ENST00000580541 TRAFD1O14545 582 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms