RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 TESK1Q15569 626 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 SNAP47Q5SQN1 464 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 SYPL2Q5VXT5 272 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 SPECC1LQ69YQ0 1117 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 FOXR2Q6PJQ5 311 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 DENND6BQ8NEG7 585 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 CCDC114Q96M63 670 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 IMPG2Q9BZV3 1241 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 ZDHHC6Q9H6R6 413 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 SUDS3Q9H7L9 328 aaPredicted RBP14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 CNGB3Q9NQW8 809 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 KLQ9UEF7 1012 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 VPS51Q9UID3 782 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 FBXO2Q9UK22 296 aaPredicted RBP14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 TLR6Q9Y2C9 796 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 COQ6Q9Y2Z9 468 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 ACTL7AQ9Y615 435 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 CLIC4Q9Y696 253 aa14.25□□□□□ -0.13
CSNK1D-213ENST00000580446 SYNJ2BP-COX16A0A087WUM0 186 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 A6NCN8 305 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 EIF5BO60841 1220 aaKnown RBP14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 NADKO95544 446 aaPredicted RBP14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 CALCAP01258 141 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 APOEP02649 317 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 CD19P15391 556 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 L1CAMP32004 1257 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 DLSTP36957 453 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 STAT5AP42229 794 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 LEPRP48357 1165 aaKnown RBP14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 VASPP50552 380 aaPredicted RBP14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 BLKP51451 505 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 LIMK2P53671 638 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 ABHD18Q0P651 414 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 JMJD6Q6NYC1 403 aaPredicted RBP14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 FBXL22Q6P050 247 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 BMPERQ8N8U9 685 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 TP53I13Q8NBR0 393 aaPredicted RBP14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 KCTD13Q8WZ19 329 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 FUBP1Q96AE4 644 aaKnown RBP14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 SERPINB11Q96P15 392 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 PRMT1Q99873 361 aaKnown RBP14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 EFHD1Q9BUP0 239 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 WRAP53Q9BUR4 548 aaKnown RBP14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 ZMYND15Q9H091 742 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 SLC39A2Q9NP94 309 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 SLAMF7Q9NQ25 335 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 MRPL40Q9NQ50 206 aaKnown RBP14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 COX16Q9P0S2 106 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 HS3ST2Q9Y278 367 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 RPS6KL1Q9Y6S9 549 aa14.24□□□□□ -0.13
CSNK1D-213ENST00000580446 PCSK5Q92824 1860 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 TCAF2A6NFQ2 919 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 H3BQV1 296 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 ZNF821O75541 412 aaPredicted RBP14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 THRAP10827 490 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 PNLIPP16233 465 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 HNRNPH3P31942 346 aaKnown RBP14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 YPEL5P62699 121 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 PPP3CAQ08209 521 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 KLHL40Q2TBA0 621 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 ZRANB3Q5FWF4 1079 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 PMF1Q6P1K2 205 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 OGFOD3Q6PK18 319 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 PATE1Q8WXA2 126 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 OR1E3Q8WZA6 343 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 RPRD1AQ96P16 312 aaPredicted RBP14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 SRRTQ9BXP5 876 aaKnown RBP14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 TWSG1Q9GZX9 223 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 TMEM168Q9H0V1 697 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 ASF1BQ9NVP2 202 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 HESX1Q9UBX0 185 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 CROTQ9UKG9 612 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 VANGL2Q9ULK5 521 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 DCHS2Q6V1P9 2916 aa14.23□□□□□ -0.13
CSNK1D-213ENST00000580446 ANKUB1A6NFN9 424 aa14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 RHPN2P1A8MT19 583 aa14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 TSPAN6O43657 245 aa14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 AP1G1O43747 822 aa14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 NUDT21O43809 227 aaKnown RBP14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 ZG16O60844 167 aa14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 TXLNAP40222 546 aa14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 DNM1Q05193 864 aaKnown RBP14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 NNTQ13423 1086 aa14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 ANKRD40Q6AI12 368 aa14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 CCDC73Q6ZRK6 1079 aa14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 ZNF761Q86XN6 746 aaPredicted RBP14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 C12orf56Q8IXR9 622 aa14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 SEMA4DQ92854 862 aa14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 EEF2KMTQ96G04 330 aa14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 RBM15Q96T37 977 aaKnown RBP eCLIP14.22□□□□□ -0.136e-8■■■□□ 17.2
CSNK1D-213ENST00000580446 SLC25A23Q9BV35 468 aa14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 BACH2Q9BYV9 841 aa14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 PCDHB3Q9Y5E6 796 aa14.22□□□□□ -0.13
CSNK1D-213ENST00000580446 A0A0D9SEW6 157 aa14.21□□□□□ -0.13
CSNK1D-213ENST00000580446 C16orf96A6NNT2 1141 aa14.21□□□□□ -0.13
CSNK1D-213ENST00000580446 B4E171 279 aa14.21□□□□□ -0.13
CSNK1D-213ENST00000580446 ZNF28P17035 718 aa14.21□□□□□ -0.13
CSNK1D-213ENST00000580446 TSPAN7P41732 249 aa14.21□□□□□ -0.13
CSNK1D-213ENST00000580446 PPM1FP49593 454 aaPredicted RBP14.21□□□□□ -0.13
CSNK1D-213ENST00000580446 CCL11P51671 97 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms