RNA–Protein interactions for RNA: ENST00000580048.1

LINC00909-202, long intergenic non-protein coding RNA 909, humanhuman

TSL 1 (best) BASIC

Gene LINC00909, Length 3,463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00909-202ENST00000580048 CPNE1Q99829 537 aa10.35□□□□□ -0.75
LINC00909-202ENST00000580048 SH3GL1Q99961 368 aa10.35□□□□□ -0.75
LINC00909-202ENST00000580048 TUBA1CQ9BQE3 449 aa10.35□□□□□ -0.75
LINC00909-202ENST00000580048 HOXD1Q9GZZ0 328 aa10.35□□□□□ -0.75
LINC00909-202ENST00000580048 ARHGAP28Q9P2N2 729 aa10.35□□□□□ -0.75
LINC00909-202ENST00000580048 DNMT3BQ9UBC3 853 aaKnown RBP10.35□□□□□ -0.75
LINC00909-202ENST00000580048 NFIBO00712 420 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 SLC22A2O15244 555 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 ASS1P00966 412 aaKnown RBP10.34□□□□□ -0.75
LINC00909-202ENST00000580048 TPSB2P20231 275 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 PROZP22891 400 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 CYP2F1P24903 491 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 BMPR1AP36894 532 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 IST1P53990 364 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 CNTN2Q02246 1040 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 LRP8Q14114 963 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 USP10Q14694 798 aaKnown RBP10.34□□□□□ -0.75
LINC00909-202ENST00000580048 TPSAB1Q15661 275 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 VPS72Q15906 364 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 KIF19Q2TAC6 998 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 CYBRD1Q53TN4 286 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 APOBEC3HQ6NTF7 200 aaKnown RBP10.34□□□□□ -0.75
LINC00909-202ENST00000580048 KIAA0408Q6ZU52 694 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 PACRGLQ8N7B6 248 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 OR7A2PQ8NGA2 310 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 LRCH3Q96II8 777 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 UHRF1Q96T88 793 aaPredicted RBP10.34□□□□□ -0.75
LINC00909-202ENST00000580048 LGMNQ99538 433 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 RBBP8Q99708 897 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 ZNF385DQ9H6B1 395 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 CD320Q9NPF0 282 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 CCM2LQ9NUG4 571 aaPredicted RBP10.34□□□□□ -0.75
LINC00909-202ENST00000580048 NARFQ9UHQ1 456 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 TLL2Q9Y6L7 1015 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 H0Y858 1186 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 NR5A2O00482 541 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 SDHDO14521 159 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 NRP2O60462 931 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 H2AFYO75367 372 aaKnown RBP10.34□□□□□ -0.75
LINC00909-202ENST00000580048 SEC14L2O76054 403 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 ALDH1A2O94788 518 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 TGM2P21980 687 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 ACTR2P61160 394 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 MPP1Q00013 466 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 ECT2LQ008S8 904 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 LAMC2Q13753 1193 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 CCDC58Q4VC31 144 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 WDR45BQ5MNZ6 344 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 TMTC4Q5T4D3 741 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 SWSAP1Q6NVH7 229 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 C4orf22Q6V702 233 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 R3HCC1LQ7Z5L2 792 aaKnown RBP10.34□□□□□ -0.75
LINC00909-202ENST00000580048 C11orf74Q86VG3 221 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 ARMC8Q8IUR7 673 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 LGI2Q8N0V4 545 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 CNPY3Q9BT09 278 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 TRIM15Q9C019 465 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 FAM49BQ9NUQ9 324 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 MRGBPQ9NV56 204 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 SLCO1B7G3V0H7 640 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 NUAK1O60285 661 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 DAB1O75553 588 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 BMP4P12644 408 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 NCK1P16333 377 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 IL4RP24394 825 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 ZNF460Q14592 562 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 CLEC4FQ8N1N0 589 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 APOL2Q9BQE5 337 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 SNRNP25Q9BV90 132 aaKnown RBP10.34□□□□□ -0.75
LINC00909-202ENST00000580048 DNAJC5Q9H3Z4 198 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 GPN2Q9H9Y4 310 aaPredicted RBP10.34□□□□□ -0.75
LINC00909-202ENST00000580048 TRIM39Q9HCM9 518 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 SCUBE2Q9NQ36 999 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 IARS2Q9NSE4 1012 aaKnown RBP10.34□□□□□ -0.75
LINC00909-202ENST00000580048 ANKEF1Q9NU02 776 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 XPR1Q9UBH6 696 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 MID2Q9UJV3 735 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 MFHAS1Q9Y4C4 1052 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 SNX5Q9Y5X3 404 aa10.34□□□□□ -0.75
LINC00909-202ENST00000580048 CDK5RAP2Q96SN8 1893 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 TRPC5OSA6NMA1 111 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 RAD51BO15315 384 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 MED7O43513 233 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 CCNKO75909 580 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 RASAL1O95294 804 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 UGT2B4P06133 528 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 CCT8P50990 548 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 ZNF143P52747 638 aaPredicted RBP10.33□□□□□ -0.76
LINC00909-202ENST00000580048 NSUN2Q08J23 767 aaKnown RBP eCLIP10.33□□□□□ -0.76
LINC00909-202ENST00000580048 LRIT3Q3SXY7 679 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 SLC27A3Q5K4L6 730 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 GATAD2AQ86YP4 633 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 RNF135Q8IUD6 432 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 SPNS2Q8IVW8 549 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 SCML4Q8N228 414 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 TMEM130Q8N3G9 435 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 TTC30BQ8N4P2 665 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 MINDY2Q8NBR6 621 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 PSD4Q8NDX1 1056 aa10.33□□□□□ -0.76
LINC00909-202ENST00000580048 S100ZQ8WXG8 99 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms