RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 PALM2Q8IXS6 379 aa14.09□□□□□ -0.15
CSNK1D-209ENST00000578904 KLHDC8BQ8IXV7 354 aa14.09□□□□□ -0.15
CSNK1D-209ENST00000578904 ZNF687Q8N1G0 1237 aa14.09□□□□□ -0.15
CSNK1D-209ENST00000578904 ZNF513Q8N8E2 541 aaPredicted RBP14.09□□□□□ -0.15
CSNK1D-209ENST00000578904 KDM1BQ8NB78 822 aa14.09□□□□□ -0.15
CSNK1D-209ENST00000578904 UBLCP1Q8WVY7 318 aaPredicted RBP14.09□□□□□ -0.15
CSNK1D-209ENST00000578904 GDAP1L1Q96MZ0 367 aa14.09□□□□□ -0.15
CSNK1D-209ENST00000578904 SERPINB12Q96P63 405 aa14.09□□□□□ -0.15
CSNK1D-209ENST00000578904 TBL1YQ9BQ87 522 aa14.09□□□□□ -0.15
CSNK1D-209ENST00000578904 CCDC77Q9BR77 488 aa14.09□□□□□ -0.15
CSNK1D-209ENST00000578904 LMAN1LQ9HAT1 526 aa14.09□□□□□ -0.15
CSNK1D-209ENST00000578904 SAYSD1Q9NPB0 183 aa14.09□□□□□ -0.15
CSNK1D-209ENST00000578904 SAMD15Q9P1V8 674 aa14.09□□□□□ -0.15
CSNK1D-209ENST00000578904 SIT1Q9Y3P8 196 aa14.09□□□□□ -0.15
CSNK1D-209ENST00000578904 A0A1W2PQ67 120 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 SDR42E2A6NKP2 422 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 E7ESA3 106 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 NPC1O15118 1278 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 ALOX15BO15296 676 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 GPR37L1O60883 481 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 PMPCBO75439 489 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 TMEM63AO94886 807 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 CPP00450 1065 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 GSTA2P09210 222 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 FAM153BP0C7A2 387 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 CD86P42081 329 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 KIR2DL1P43626 348 aaPredicted RBP14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 MAXP61244 160 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 BBS9Q3SYG4 887 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 FAM153CQ494X1 144 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 ACCSLQ4AC99 568 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 CCDC38Q502W7 563 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 C2orf27AQ580R0 203 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 ALS2CLQ60I27 953 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 DENND2CQ68D51 928 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 LEKR1Q6ZMV7 388 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 Q6ZS52 159 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 TRMT11Q7Z4G4 463 aaKnown RBP14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 PLPP6Q8IY26 295 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 ZBED8Q8IZ13 594 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 NDUFAF2Q8N183 169 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 SYNPOQ8N3V7 929 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 SH2D3CQ8N5H7 860 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 PAF1Q8N7H5 531 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 TSEN2Q8NCE0 465 aaKnown RBP14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 IPMKQ8NFU5 416 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 RPLP0P6Q8NHW5 317 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 FEM1CQ96JP0 617 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 ADGRE3Q9BY15 652 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 PABPC3Q9H361 631 aaKnown RBP14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 VIPAS39Q9H9C1 493 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 ZDHHC4Q9NPG8 344 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 ERVW-1Q9UQF0 538 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 STARD13Q9Y3M8 1113 aa14.08□□□□□ -0.16
CSNK1D-209ENST00000578904 TCRBV7S3A2A0A539 114 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 ANTXRLA6NF34 631 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 F5H423 210 aaPredicted RBP14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 TP73O15350 636 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 KLF8O95600 359 aaPredicted RBP14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 GSRP00390 522 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 DCNP07585 359 aaKnown RBP14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 HLA-DPA1P20036 260 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 NFKBIAP25963 317 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 STK19P49842 368 aaPredicted RBP14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 EIF3BP55884 814 aaKnown RBP14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 WNT3AP56704 352 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 MRPS21P82921 87 aaKnown RBP14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 DSC2Q02487 901 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 ZNF234Q14588 700 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 CASP8Q14790 479 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 EMC10Q5UCC4 262 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 CASC4Q6P4E1 433 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 SRLQ86TD4 932 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 CHPFQ8IZ52 775 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 CNPY4Q8N129 248 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 PGBD5Q8N414 524 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 OR2AP1Q8NGE2 309 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 SPATA22Q8NHS9 363 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 KCNV2Q8TDN2 545 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 PBXIP1Q96AQ6 731 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 RPL10LQ96L21 214 aaKnown RBP14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 TUBGCP5Q96RT8 1024 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 SRPK1Q96SB4 655 aaKnown RBP14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 MLPHQ9BV36 600 aaPredicted RBP14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 IL22Q9GZX6 179 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 CASS4Q9NQ75 786 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 UBP1Q9NZI7 540 aa14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 THAP10Q9P2Z0 257 aaPredicted RBP14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 FCF1Q9Y324 198 aaKnown RBP14.07□□□□□ -0.16
CSNK1D-209ENST00000578904 MUC22E2RYF6 1773 aaPredicted RBP14.06□□□□□ -0.16
CSNK1D-209ENST00000578904 TRIOO75962 3097 aa14.06□□□□□ -0.16
CSNK1D-209ENST00000578904 ATP9BO43861 1147 aa14.06□□□□□ -0.16
CSNK1D-209ENST00000578904 POP4O95707 220 aaKnown RBP14.06□□□□□ -0.16
CSNK1D-209ENST00000578904 TTC4O95801 387 aa14.06□□□□□ -0.16
CSNK1D-209ENST00000578904 MT-CYBP00156 380 aaPredicted RBP14.06□□□□□ -0.16
CSNK1D-209ENST00000578904 FGF1P05230 155 aa14.06□□□□□ -0.16
CSNK1D-209ENST00000578904 SRCP12931 536 aa14.06□□□□□ -0.16
CSNK1D-209ENST00000578904 HNRNPLP14866 589 aaKnown RBP eCLIP14.06□□□□□ -0.16
CSNK1D-209ENST00000578904 AOC1P19801 751 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms