RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 RBM5P52756 815 aaKnown RBP eCLIP2.58□□□□□ -2
TOP2A-202ENST00000577541 ACTR2P61160 394 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 GAGE1Q13065 139 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 GAGE4Q13068 117 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 MYBPC2Q14324 1141 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 IL13RA2Q14627 380 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 BRD3Q15059 726 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 PLCB4Q15147 1175 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 CTXN3Q4LDR2 81 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 FAM83BQ5T0W9 1011 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 FAM69BQ5VUD6 431 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 NEK10Q6ZWH5 1172 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 HERC6Q8IVU3 1022 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 USP38Q8NB14 1042 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 GPT2Q8TD30 523 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 SH3KBP1Q96B97 665 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 ZNF414Q96IQ9 312 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 NPLQ9BXD5 320 aaPredicted RBP2.58□□□□□ -2
TOP2A-202ENST00000577541 NPFFR1Q9GZQ6 430 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 ACAD9Q9H845 621 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 WDR6Q9NNW5 1121 aaKnown RBP2.58□□□□□ -2
TOP2A-202ENST00000577541 ANKRD10Q9NXR5 420 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 NLKQ9UBE8 527 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 DHDHQ9UQ10 334 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 GAB2Q9UQC2 676 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 DERAQ9Y315 318 aa2.58□□□□□ -2
TOP2A-202ENST00000577541 IGKV3D-15A0A087WSY6 115 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 A0A1B0GVM2 712 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 DYTNA2CJ06 578 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 CPED1A4D0V7 1026 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 HMX3A6NHT5 357 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 CBY3A6NI87 242 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 FAM90A7PA6NKC0 464 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 FAM90A22PA8MWA6 464 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 FAM90A12PA8MX19 464 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 FAM90A23PA8MXZ1 464 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 CHL1O00533 1208 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 ADAP00813 363 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 RYKP34925 604 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 RFC1P35251 1148 aaPredicted RBP2.57□□□□□ -2
TOP2A-202ENST00000577541 HNF1BP35680 557 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 GRK6P43250 576 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 BLKP51451 505 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 TMPRSS3P57727 454 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 CHAF1AQ13111 956 aaPredicted RBP2.57□□□□□ -2
TOP2A-202ENST00000577541 CUL4BQ13620 913 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 ME3Q16798 604 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 PLEKHO1Q53GL0 409 aaPredicted RBP2.57□□□□□ -2
TOP2A-202ENST00000577541 DENND6AQ8IWF6 608 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 AADATQ8N5Z0 425 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 ENAHQ8N8S7 591 aaPredicted RBP2.57□□□□□ -2
TOP2A-202ENST00000577541 ZNF114Q8NC26 417 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 SNAPC3Q92966 411 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 RNFT2Q96EX2 444 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 LTV1Q96GA3 475 aaPredicted RBP2.57□□□□□ -2
TOP2A-202ENST00000577541 TTC12Q9H892 705 aaPredicted RBP2.57□□□□□ -2
TOP2A-202ENST00000577541 SCRT2Q9NQ03 307 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 KIF17Q9P2E2 1029 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 DAAM1Q9Y4D1 1078 aa2.57□□□□□ -2
TOP2A-202ENST00000577541 IGLV5-37A0A075B6J1 123 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 B9A039 149 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 LMX1BO60663 402 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 SERPINI2O75830 405 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 CHRM4P08173 479 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 CFC1BP0CG36 223 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 CFC1P0CG37 223 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 IGHV4-30-4P0DP06 118 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 CKMT1AP12532 417 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 C21orf33P30042 268 aaPredicted RBP2.56□□□□□ -2
TOP2A-202ENST00000577541 AARSP49588 968 aaKnown RBP eCLIP2.56□□□□□ -2
TOP2A-202ENST00000577541 ATP12AP54707 1039 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 ARSFP54793 590 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 GRSF1Q12849 480 aaKnown RBP eCLIP2.56□□□□□ -2
TOP2A-202ENST00000577541 PRKG1Q13976 671 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 LPIN1Q14693 890 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 POSTNQ15063 836 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 AP5B1Q2VPB7 878 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 SETMARQ53H47 684 aaPredicted RBP2.56□□□□□ -2
TOP2A-202ENST00000577541 SH2D4BQ5SQS7 431 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 NAPEPLDQ6IQ20 393 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 SUSD1Q6UWL2 747 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 MOGAT3Q86VF5 341 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 FJX1Q86VR8 437 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 PALB2Q86YC2 1186 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 SFTPA2Q8IWL1 248 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 LYG1Q8N1E2 194 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 TMEM57Q8N5G2 664 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 LMNTD1Q8N9Z9 388 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 LINS1Q8NG48 757 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 LILRB1Q8NHL6 650 aaPredicted RBP2.56□□□□□ -2
TOP2A-202ENST00000577541 CSGALNACT1Q8TDX6 532 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 IGSF21Q96ID5 467 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 PGLYRP2Q96PD5 576 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 CLSTN3Q9BQT9 956 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 PYGO2Q9BRQ0 406 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 MMTAG2Q9BU76 263 aaKnown RBP2.56□□□□□ -2
TOP2A-202ENST00000577541 CTDSP1Q9GZU7 261 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 ENTPD7Q9NQZ7 604 aa2.56□□□□□ -2
TOP2A-202ENST00000577541 SPATS2LQ9NUQ6 558 aaKnown RBP2.56□□□□□ -2
TOP2A-202ENST00000577541 FEM1BQ9UK73 627 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms