RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 GNG11P61952 73 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 BCL2L1Q07817 233 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 SIX1Q15475 284 aaPredicted RBP20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 LPAL2Q16609 132 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 ZSWIM9Q86XI8 627 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 DEFB119Q8N690 84 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 OR14C36Q8NHC7 312 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 SPOCK2Q92563 424 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 AGAP3Q96P47 875 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 PCED1AQ9H1Q7 454 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 KDM4CQ9H3R0 1056 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 C6orf106Q9H6K1 298 aaPredicted RBP20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 DYRK4Q9NR20 520 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 PCDHGC4Q9Y5F7 938 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 OTOGLQ3ZCN5 2332 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 BCLAF3A2AJT9 711 aaKnown RBP20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 METTL12A8MUP2 240 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 CEP104O60308 925 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 MMP2P08253 660 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 ADRB3P13945 408 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 NEK3P51956 506 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 DSC2Q02487 901 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 ITKQ08881 620 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 CCDC15Q0P6D6 951 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 ELF2Q15723 593 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 FBXL19Q6PCT2 694 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 RASGEF1CQ8N431 466 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 OR2T34Q8NGX1 318 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 NKD2Q969F2 451 aaPredicted RBP20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 PBKQ96KB5 322 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 SEPT10Q9P0V9 454 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 LMNAP02545 664 aaKnown RBP20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 FGGP02679 453 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 SERPINA4P29622 427 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 CD68P34810 354 aaPredicted RBP20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 HS1BP3Q53T59 392 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 ADAT2Q7Z6V5 191 aaKnown RBP20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 TTC7BQ86TV6 843 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 ZNF567Q8N184 647 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 LOXL4Q96JB6 756 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 VAT1Q99536 393 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 HAUS2Q9NVX0 235 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 DNPEPQ9ULA0 475 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 SNX12Q9UMY4 172 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 FADS3Q9Y5Q0 445 aa20.2■□□□□ 0.82
SUPT4H1-202ENST00000577396 RIF1Q5UIP0 2472 aaKnown RBP20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 LAMA1P25391 3075 aa20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 EP300Q09472 2414 aaPredicted RBP20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 AREL1O15033 823 aa20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 FANCGO15287 622 aa20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 SPINT1O43278 529 aa20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 AP1G1O43747 822 aa20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 SOCS5O75159 536 aa20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 ABL2P42684 1182 aa20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 TRAF2Q12933 501 aa20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 UGP2Q16851 508 aa20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 DARS2Q6PI48 645 aaKnown RBP20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 BRAT1Q6PJG6 821 aa20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 PRPF39Q86UA1 669 aaKnown RBP20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 CDKL3Q8IVW4 592 aaPredicted RBP20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 COG1Q8WTW3 980 aa20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 RAB7BQ96AH8 199 aa20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 TADA1Q96BN2 335 aa20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 IMP4Q96G21 291 aaKnown RBP20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 OSBPL9Q96SU4 736 aa20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 GLOD4Q9HC38 313 aa20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 TTC7AQ9ULT0 858 aaPredicted RBP20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 TTLL3Q9Y4R7 772 aa20.19■□□□□ 0.82
SUPT4H1-202ENST00000577396 CEP192Q8TEP8 1941 aa20.18■□□□□ 0.82
SUPT4H1-202ENST00000577396 FAM47DPA6NHR8 397 aa20.18■□□□□ 0.82
SUPT4H1-202ENST00000577396 LRRC72A6NJI9 287 aa20.18■□□□□ 0.82
SUPT4H1-202ENST00000577396 FZD6O60353 706 aa20.18■□□□□ 0.82
SUPT4H1-202ENST00000577396 NEBLO76041 1014 aa20.18■□□□□ 0.82
SUPT4H1-202ENST00000577396 IGHV4-34P06331 123 aa20.18■□□□□ 0.82
SUPT4H1-202ENST00000577396 LAIR1Q6GTX8 287 aa20.18■□□□□ 0.82
SUPT4H1-202ENST00000577396 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.18■□□□□ 0.82
SUPT4H1-202ENST00000577396 ATG4AQ8WYN0 398 aa20.18■□□□□ 0.82
SUPT4H1-202ENST00000577396 DNASE2BQ8WZ79 361 aa20.18■□□□□ 0.82
SUPT4H1-202ENST00000577396 FOXJ1Q92949 421 aa20.18■□□□□ 0.82
SUPT4H1-202ENST00000577396 BIRC7Q96CA5 298 aa20.18■□□□□ 0.82
SUPT4H1-202ENST00000577396 HSPA12BQ96MM6 686 aa20.18■□□□□ 0.82
SUPT4H1-202ENST00000577396 FRMD8P1Q9BZ68 369 aaPredicted RBP20.18■□□□□ 0.82
SUPT4H1-202ENST00000577396 SLC25A51Q9H1U9 297 aa20.18■□□□□ 0.82
SUPT4H1-202ENST00000577396 RAB23Q9ULC3 237 aa20.18■□□□□ 0.82
SUPT4H1-202ENST00000577396 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.18■□□□□ 0.82
SUPT4H1-202ENST00000577396 TBC1D3DA0A087WVF3 549 aa20.17■□□□□ 0.82
SUPT4H1-202ENST00000577396 TBC1D3IA0A087WXS9 549 aa20.17■□□□□ 0.82
SUPT4H1-202ENST00000577396 TBC1D3EA0A087X179 549 aa20.17■□□□□ 0.82
SUPT4H1-202ENST00000577396 TBC1D3KA0A087X1G2 549 aa20.17■□□□□ 0.82
SUPT4H1-202ENST00000577396 TBC1D3FA6NER0 549 aaPredicted RBP20.17■□□□□ 0.82
SUPT4H1-202ENST00000577396 TBC1D3LB9A6J9 549 aa20.17■□□□□ 0.82
SUPT4H1-202ENST00000577396 LIASO43766 372 aa20.17■□□□□ 0.82
SUPT4H1-202ENST00000577396 TBC1D3HP0C7X1 549 aa20.17■□□□□ 0.82
SUPT4H1-202ENST00000577396 ITIH2P19823 946 aa20.17■□□□□ 0.82
SUPT4H1-202ENST00000577396 SKOR1P84550 965 aa20.17■□□□□ 0.82
SUPT4H1-202ENST00000577396 OASLQ15646 514 aaKnown RBP20.17■□□□□ 0.82
SUPT4H1-202ENST00000577396 PAPD7Q5XG87 772 aaKnown RBP20.17■□□□□ 0.82
SUPT4H1-202ENST00000577396 KIAA0895LQ68EN5 471 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms