RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 TSEN2Q8NCE0 465 aaKnown RBP12.04□□□□□ -0.48
LITAF-219ENST00000576334 TSC1Q92574 1164 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 HSPH1Q92598 858 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 C1QTNF2Q9BXJ5 285 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 EDEM3Q9BZQ6 932 aa12.04□□□□□ -0.48
LITAF-219ENST00000576334 TCEAL2Q9H3H9 227 aaPredicted RBP12.04□□□□□ -0.48
LITAF-219ENST00000576334 MBNL1Q9NR56 388 aaKnown RBP12.04□□□□□ -0.48
LITAF-219ENST00000576334 UBA2Q9UBT2 640 aaPredicted RBP12.04□□□□□ -0.48
LITAF-219ENST00000576334 CXorf51AA0A1B0GTR3 108 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 ZSCAN5CA6NGD5 496 aaPredicted RBP12.03□□□□□ -0.48
LITAF-219ENST00000576334 DFFAO00273 331 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 DAPK3O43293 454 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 RNF8O76064 485 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 AMPD1P23109 780 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 CASP14P31944 242 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 CCDC15Q0P6D6 951 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 OVGP1Q12889 678 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 CAMK2BQ13554 666 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 DPYSQ14117 519 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 INAVAQ3KP66 663 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 VPS36Q86VN1 386 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 FNIP1Q8TF40 1166 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 XPO4Q9C0E2 1151 aaKnown RBP12.03□□□□□ -0.48
LITAF-219ENST00000576334 GPR27Q9NS67 375 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 KLHL11Q9NVR0 708 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 DNAJC28Q9NX36 388 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 CAPN11Q9UMQ6 739 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 PKD1L2Q7Z442 2459 aa12.03□□□□□ -0.48
LITAF-219ENST00000576334 LOC400499M0QZD8 3231 aa12.02□□□□□ -0.48
LITAF-219ENST00000576334 ANKRD11Q6UB99 2663 aaPredicted RBP12.02□□□□□ -0.49
LITAF-219ENST00000576334 SHROOM3Q8TF72 1996 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 A0A1W2PQJ5 194 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 TRABD2BA6NFA1 517 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 A6NNZ2 444 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 GOLGA6L19H0YKK7 550 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 SCAMP1O15126 338 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 CASC3O15234 703 aaKnown RBP12.02□□□□□ -0.49
LITAF-219ENST00000576334 TSPAN6O43657 245 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 MAGEC1O60732 1142 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 PIAS2O75928 621 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 SERPING1P05155 500 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 CD48P09326 243 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 RARAP10276 462 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 IGFALSP35858 605 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 NDST2P52849 883 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 ZBED6P86452 979 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 EIF2B5Q13144 721 aaKnown RBP12.02□□□□□ -0.49
LITAF-219ENST00000576334 MMRN1Q13201 1228 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 SGCGQ13326 291 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 PDE1CQ14123 709 aaPredicted RBP12.02□□□□□ -0.49
LITAF-219ENST00000576334 TCEA2Q15560 299 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 SMAD1Q15797 465 aaKnown RBP12.02□□□□□ -0.49
LITAF-219ENST00000576334 PROX2Q3B8N5 592 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 ATP13A4Q4VNC1 1196 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 FAM182AQ5T1J6 154 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 PPP1R2P3Q6NXS1 205 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 KYAT3Q6YP21 454 aaKnown RBP12.02□□□□□ -0.49
LITAF-219ENST00000576334 RBFAQ8N0V3 343 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 OXR1Q8N573 874 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 LRRN4Q8WUT4 740 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 FUBP1Q96AE4 644 aaKnown RBP12.02□□□□□ -0.49
LITAF-219ENST00000576334 CENPTQ96BT3 561 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 LRIG1Q96JA1 1093 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 NCAPGQ9BPX3 1015 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 NUP85Q9BW27 656 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 OSBPL1AQ9BXW6 950 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 PACSIN1Q9BY11 444 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 SUV39H2Q9H5I1 410 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.02□□□□□ -0.49
LITAF-219ENST00000576334 ANAPC7Q9UJX3 599 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 HS3ST3A1Q9Y663 406 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 SCINQ9Y6U3 715 aa12.02□□□□□ -0.49
LITAF-219ENST00000576334 LY6G6EA0A0G2JKS1 128 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 SPTY2D1-AS1A0A0U1RR47 76 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 ARHGAP42A6NI28 874 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 A8MX80 341 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 FPGTO14772 594 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 YKT6O15498 198 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 RFPL3O75679 317 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 PALMO75781 387 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 MYBL1P10243 752 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 CKMT2P17540 419 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 DESP17661 470 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 PFN3P60673 137 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 TPM4P67936 248 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 SLC25A11Q02978 314 aaKnown RBP12.01□□□□□ -0.49
LITAF-219ENST00000576334 CYP4F3Q08477 520 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 SLC10A7Q0GE19 358 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 PTPRRQ15256 657 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 CCDC122Q5T0U0 273 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 HES3Q5TGS1 186 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 KCTD16Q68DU8 428 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 POLNQ7Z5Q5 900 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 SRLQ86TD4 932 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 PROSER1Q86XN7 944 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 PGBD5Q8N414 524 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 TP53I13Q8NBR0 393 aaPredicted RBP12.01□□□□□ -0.49
LITAF-219ENST00000576334 CASKIN2Q8WXE0 1202 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 RAB7BQ96AH8 199 aa12.01□□□□□ -0.49
LITAF-219ENST00000576334 LENG8Q96PV6 779 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms