RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 LIFP15018 202 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 GLB1P16278 677 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 ARHGEF7Q14155 803 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 C16orf72Q14CZ0 275 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 KLHL40Q2TBA0 621 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 ATL3Q6DD88 541 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 SPRED1Q7Z699 444 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 SLITRK4Q8IW52 837 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 CXorf40AQ8TE69 158 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 ZNF606Q8WXB4 792 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 ARHGEF26Q96DR7 871 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 EPAS1Q99814 870 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 WDCPQ9H6R7 721 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 ANLNQ9NQW6 1124 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 LRIT1Q9P2V4 623 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 DRGXA6NNA5 263 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 TOR1BO14657 336 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 THAP12O43422 761 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 SRGAP2O75044 1071 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 ZMPSTE24O75844 475 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 UGT2B4P06133 528 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 ITIH2P19823 946 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 PRCPP42785 496 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 PMS1P54277 932 aaKnown RBP16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 SRP54P61011 504 aaKnown RBP16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 CETN1Q12798 172 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 MAP9Q49MG5 647 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 ATCAYQ86WG3 371 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 SFTPA2Q8IWL1 248 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 ZNF683Q8IZ20 524 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 TP53I13Q8NBR0 393 aaPredicted RBP16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 FAM46DQ8NEK8 389 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 GPR156Q8NFN8 814 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 LMO3Q8TAP4 145 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 KREMEN1Q96MU8 473 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 KLHL32Q96NJ5 620 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 WRAP53Q9BUR4 548 aaKnown RBP16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 GTPBP4Q9BZE4 634 aaKnown RBP16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 RDH14Q9HBH5 336 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 ACP6Q9NPH0 428 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 PIGVQ9NUD9 493 aa16.48■□□□□ 0.23
CTDNEP1-211ENST00000575783 ILVBLA1L0T0 632 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 TMEM110-MUSTN1A8MSY1 372 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 I6L893 689 aaPredicted RBP16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 AREL1O15033 823 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 MTSS1O43312 755 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 HTR1BP28222 390 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 PEX5P50542 639 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 ARF5P84085 180 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 GCNT1Q02742 428 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 IRF4Q15306 451 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 AMZ1Q400G9 498 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 CERCAMQ5T4B2 595 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 KRBA2Q6ZNG9 492 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 PIM3Q86V86 326 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 RCBTB1Q8NDN9 531 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 MIB2Q96AX9 1013 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 CATSPER2Q96P56 530 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 CPXM1Q96SM3 734 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 B3GNT4Q9C0J1 378 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 TMPRSS4Q9NRS4 437 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 ASNSD1Q9NWL6 643 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 KLQ9UEF7 1012 aa16.47■□□□□ 0.23
CTDNEP1-211ENST00000575783 K7ELQ4 463 aaPredicted RBP16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 NKX2-8O15522 239 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 TNFP01375 233 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 PRKAR1AP10644 381 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 GNA15P30679 374 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 LRRC14Q15048 493 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 MEA1Q16626 185 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 FAM183BPQ6ZVS7 135 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 TAF8Q7Z7C8 310 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 CACNA2D3Q8IZS8 1091 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 WDTC1Q8N5D0 677 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 EHBP1Q8NDI1 1231 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 PMEPA1Q969W9 287 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 ABHD17AQ96GS6 310 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 TAAR9Q96RI9 348 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 ARHGEF38Q9NXL2 777 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 CNTN6Q9UQ52 1028 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 COQ6Q9Y2Z9 468 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 OR1A2Q9Y585 309 aa16.46■□□□□ 0.23
CTDNEP1-211ENST00000575783 ITPR2Q14571 2701 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 TRIM49BA6NDI0 452 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 ZNF891A8MT65 544 aaPredicted RBP16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 B4DGG1 531 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 AGFG2O95081 481 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 CD160O95971 181 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 FGF3P11487 239 aaPredicted RBP16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 PNLIPP16233 465 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 TFE3P19532 575 aaPredicted RBP16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 UGT1A3P35503 534 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 CXCR3P49682 368 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 ARSDP51689 593 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 RNASE9P60153 205 aaKnown RBP16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 GNA12Q03113 381 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 INPP5AQ14642 412 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 NFATC4Q14934 902 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 MYLK3Q32MK0 819 aa16.45■□□□□ 0.22
CTDNEP1-211ENST00000575783 C14orf28Q4W4Y0 310 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms