RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 PRELID2Q8N945 189 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 FAM71DQ8N9W8 422 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 ARRDC2Q8TBH0 407 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 GAB3Q8WWW8 586 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 VOPP1Q96AW1 172 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 AP1M1Q9BXS5 423 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 HDAC8Q9BY41 377 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 BTBD1Q9H0C5 482 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 SLC25A51Q9H1U9 297 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 NEUROG2Q9H2A3 272 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 SGK2Q9HBY8 427 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 GLOD4Q9HC38 313 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 DKK3Q9UBP4 350 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 RNF14Q9UBS8 474 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 SERGEFQ9UGK8 458 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 RSPH14Q9UHP6 348 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 INVSQ9Y283 1065 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 PCDHGC4Q9Y5F7 938 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 SHROOM3Q8TF72 1996 aa14.13□□□□□ -0.15
RPAIN-217ENST00000575711 A0A1W2PQ67 120 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 C5orf60A6NFR6 353 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 C16orf96A6NNT2 1141 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 PLK4O00444 970 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 OPHN1O60890 802 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 NDUFS2O75306 463 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 NFKB1P19838 968 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 XPAP23025 273 aaPredicted RBP14.12□□□□□ -0.15
RPAIN-217ENST00000575711 CD86P42081 329 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 ANKRD20A2Q5SQ80 823 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 ANKRD20A1Q5TYW2 823 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 ANKRD20A3Q5VUR7 823 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 FBXL19Q6PCT2 694 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 BRAT1Q6PJG6 821 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 SLC36A4Q6YBV0 504 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 CEP68Q76N32 757 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 PARS2Q7L3T8 475 aaKnown RBP14.12□□□□□ -0.15
RPAIN-217ENST00000575711 CREG2Q8IUH2 290 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 FAM160A2Q8N612 972 aaPredicted RBP14.12□□□□□ -0.15
RPAIN-217ENST00000575711 CCDC110Q8TBZ0 833 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 HCAR2Q8TDS4 363 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 PDCD6IPQ8WUM4 868 aaKnown RBP14.12□□□□□ -0.15
RPAIN-217ENST00000575711 MAGOHBQ96A72 148 aaKnown RBP14.12□□□□□ -0.15
RPAIN-217ENST00000575711 IMP4Q96G21 291 aaKnown RBP14.12□□□□□ -0.15
RPAIN-217ENST00000575711 TOE1Q96GM8 510 aaKnown RBP14.12□□□□□ -0.15
RPAIN-217ENST00000575711 SPATA13Q96N96 652 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 DRG1Q9Y295 367 aaKnown RBP14.12□□□□□ -0.15
RPAIN-217ENST00000575711 RAI2Q9Y5P3 530 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 CACNA1IQ9P0X4 2223 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 ZNF318Q5VUA4 2279 aa14.12□□□□□ -0.15
RPAIN-217ENST00000575711 TSPAN11A1L157 253 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 TRAFD1O14545 582 aaPredicted RBP14.11□□□□□ -0.15
RPAIN-217ENST00000575711 MAP3K13O43283 966 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 HTRA2O43464 458 aaPredicted RBP14.11□□□□□ -0.15
RPAIN-217ENST00000575711 HRO43593 1189 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 LILRB5O75023 590 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 GCATO75600 419 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 IFNB1P01574 187 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 ADRB3P13945 408 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 CD68P34810 354 aaPredicted RBP14.11□□□□□ -0.15
RPAIN-217ENST00000575711 ACTN2P35609 894 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 ADPRHP54922 357 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 GDF10P55107 478 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 SKOR1P84550 965 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 TRAF2Q12933 501 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 SRSF5Q13243 272 aaKnown RBP14.11□□□□□ -0.15
RPAIN-217ENST00000575711 PRPSAP1Q14558 356 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 CYP1B1Q16678 543 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 P3H1Q32P28 736 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 PIP5KL1Q5T9C9 394 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 ARMC12Q5T9G4 340 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 AGBL4Q5VU57 503 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 ARHGEF18Q6ZSZ5 1173 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 GSTA5Q7RTV2 222 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 TTC7BQ86TV6 843 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 FRMD1Q8N878 549 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 CCDC89Q8N998 374 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 C12orf50Q8NA57 414 aaPredicted RBP14.11□□□□□ -0.15
RPAIN-217ENST00000575711 OR14C36Q8NHC7 312 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 ZNF592Q92610 1267 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 RAB7BQ96AH8 199 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 FAM131CQ96AQ9 280 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 ECHDC3Q96DC8 303 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 RTP4Q96DX8 246 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 NSMCE3Q96MG7 304 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 PPP1R2P1Q96PQ5 205 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 FCRL5Q96RD9 977 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 RBM15Q96T37 977 aaKnown RBP eCLIP14.11□□□□□ -0.15
RPAIN-217ENST00000575711 GBA3Q9H227 469 aa14.11□□□□□ -0.15
RPAIN-217ENST00000575711 WSB2Q9NYS7 404 aaPredicted RBP14.11□□□□□ -0.15
RPAIN-217ENST00000575711 FAM47DPA6NHR8 397 aa14.1□□□□□ -0.15
RPAIN-217ENST00000575711 LRRC72A6NJI9 287 aa14.1□□□□□ -0.15
RPAIN-217ENST00000575711 PLRG1O43660 514 aaKnown RBP14.1□□□□□ -0.15
RPAIN-217ENST00000575711 PHF2O75151 1096 aa14.1□□□□□ -0.15
RPAIN-217ENST00000575711 PGLSO95336 258 aa14.1□□□□□ -0.15
RPAIN-217ENST00000575711 SEMA4FO95754 770 aa14.1□□□□□ -0.15
RPAIN-217ENST00000575711 CPP00450 1065 aa14.1□□□□□ -0.15
RPAIN-217ENST00000575711 MMP2P08253 660 aa14.1□□□□□ -0.15
RPAIN-217ENST00000575711 ACSL1P33121 698 aa14.1□□□□□ -0.15
RPAIN-217ENST00000575711 KCNJ1P48048 391 aa14.1□□□□□ -0.15
RPAIN-217ENST00000575711 SUOXP51687 545 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms