RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 PDE1BQ01064 536 aa28.71■■■□□ 2.19
CTDNEP1-210ENST00000574322 INSCQ1MX18 579 aa28.71■■■□□ 2.19
CTDNEP1-210ENST00000574322 INO80DQ53TQ3 878 aaPredicted RBP28.71■■■□□ 2.19
CTDNEP1-210ENST00000574322 FSCBQ5H9T9 825 aa28.71■■■□□ 2.19
CTDNEP1-210ENST00000574322 PEX13Q92968 403 aa28.71■■■□□ 2.19
CTDNEP1-210ENST00000574322 MRPL38Q96DV4 380 aaKnown RBP28.71■■■□□ 2.19
CTDNEP1-210ENST00000574322 ALG14Q96F25 216 aa28.71■■■□□ 2.19
CTDNEP1-210ENST00000574322 TRIB3Q96RU7 358 aa28.71■■■□□ 2.19
CTDNEP1-210ENST00000574322 DNMT3BQ9UBC3 853 aaKnown RBP28.71■■■□□ 2.19
CTDNEP1-210ENST00000574322 HELZP42694 1942 aaKnown RBP28.71■■■□□ 2.19
CTDNEP1-210ENST00000574322 CBX4O00257 560 aa28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 CD160O95971 181 aa28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 PTPN2P17706 415 aa28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 CCR2P41597 374 aa28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 LAMB3Q13751 1172 aa28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 CNGA3Q16281 694 aa28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 UGP2Q16851 508 aa28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 TSTD2Q5T7W7 516 aa28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 FSTL4Q6MZW2 842 aa28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 KYAT3Q6YP21 454 aaKnown RBP28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 YTHDF3Q7Z739 585 aaKnown RBP28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 CARNMT1Q8N4J0 409 aa28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 LEMD2Q8NC56 503 aa28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 SHKBP1Q8TBC3 707 aa28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 PITPNM3Q9BZ71 974 aa28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 SLC13A1Q9BZW2 595 aa28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 DCDC2Q9UHG0 476 aa28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 ACTL7AQ9Y615 435 aa28.7■■■□□ 2.19
CTDNEP1-210ENST00000574322 VAPBO95292 243 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 HNRNPA1P09651 372 aaKnown RBP eCLIP28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 SERPINB4P48594 390 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 PDE1CQ14123 709 aaPredicted RBP28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 DCLK2Q8N568 766 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 ANKS4BQ8N8V4 417 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 IFT43Q96FT9 208 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 CABS1Q96KC9 395 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 MAN1C1Q9NR34 630 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 SLC2A6Q9UGQ3 507 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 STARD13Q9Y3M8 1113 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 ARIH1Q9Y4X5 557 aaPredicted RBP28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 LEFTY2O00292 366 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 INSIG1O15503 277 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 EDF1O60869 148 aaKnown RBP28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 GLRA3O75311 464 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 SERPINB8P50452 374 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 MPPE1Q53F39 396 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 TDRD5Q8NAT2 981 aaKnown RBP28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 NUDCD1Q96RS6 583 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 RHOJQ9H4E5 214 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 NOD2Q9HC29 1040 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 RIMKLBQ9ULI2 386 aa28.69■■■□□ 2.18
CTDNEP1-210ENST00000574322 E2F8A0AVK6 867 aa28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 KLF11O14901 512 aa28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 GJB3O75712 270 aa28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 NDST3O95803 873 aa28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 POU2F2P09086 479 aa28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 GJA1P17302 382 aa28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 MZF1P28698 734 aaPredicted RBP28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 POLD2P49005 469 aa28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 CSRP3P50461 194 aa28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 NSUN2Q08J23 767 aaKnown RBP eCLIP28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 FYB2Q5VWT5 728 aa28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 CGB2Q6NT52 195 aa28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 ZC3HC1Q86WB0 502 aaKnown RBP28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 BBS7Q8IWZ6 715 aa28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 DCAF4L2Q8NA75 395 aa28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 ATP2A3Q93084 1043 aa28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 GPR22Q99680 433 aa28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 FAM167BQ9BTA0 163 aa28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 MANSC1Q9H8J5 431 aa28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 HCFC1R1Q9NWW0 138 aa28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 USP15Q9Y4E8 981 aaPredicted RBP28.68■■■□□ 2.18
CTDNEP1-210ENST00000574322 CLASP2O75122 1294 aaKnown RBP28.67■■■□□ 2.18
CTDNEP1-210ENST00000574322 MOSPD3O75425 235 aa28.67■■■□□ 2.18
CTDNEP1-210ENST00000574322 TYK2P29597 1187 aa28.67■■■□□ 2.18
CTDNEP1-210ENST00000574322 RGRP47804 291 aa28.67■■■□□ 2.18
CTDNEP1-210ENST00000574322 CDH18Q13634 790 aa28.67■■■□□ 2.18
CTDNEP1-210ENST00000574322 SEPT6Q14141 434 aa28.67■■■□□ 2.18
CTDNEP1-210ENST00000574322 DBN1Q16643 649 aa28.67■■■□□ 2.18
CTDNEP1-210ENST00000574322 KIAA0408Q6ZU52 694 aa28.67■■■□□ 2.18
CTDNEP1-210ENST00000574322 Q7L0L9 218 aa28.67■■■□□ 2.18
CTDNEP1-210ENST00000574322 SPOCK2Q92563 424 aa28.67■■■□□ 2.18
CTDNEP1-210ENST00000574322 VPS39Q96JC1 886 aa28.67■■■□□ 2.18
CTDNEP1-210ENST00000574322 SNX15Q9NRS6 342 aa28.67■■■□□ 2.18
CTDNEP1-210ENST00000574322 SCAMP3O14828 347 aaKnown RBP28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 BIRC5O15392 142 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 IL1BP01584 269 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 MPOP05164 745 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 ACVR1Q04771 509 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 ZKSCAN8Q15776 578 aaPredicted RBP28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 SMAD1Q15797 465 aaKnown RBP28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 RALGPS1Q5JS13 557 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 SPATA21Q7Z572 469 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 TASP1Q9H6P5 420 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 PHTF1Q9UMS5 762 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 MTO1Q9Y2Z2 717 aaKnown RBP28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 MYO9BQ13459 2157 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 CXorf51AA0A1B0GTR3 108 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 CCDC78A2IDD5 438 aa28.66■■■□□ 2.18
CTDNEP1-210ENST00000574322 LDB2O43679 373 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms