RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 LHX3Q9UBR4 397 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 GOLGA4Q13439 2230 aaKnown RBP16.7■□□□□ 0.26
TVP23B-206ENST00000574226 A0A087X0T9 212 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 NEMP2A6NFY4 417 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 IGLON5A6NGN9 336 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 PALMO75781 387 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 FAM228BP0C875 321 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 CASP14P31944 242 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 ABL2P42684 1182 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 HNRNPKP61978 463 aaKnown RBP eCLIP16.69■□□□□ 0.26
TVP23B-206ENST00000574226 BNIP3Q12983 259 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 DPYSQ14117 519 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 CCDC122Q5T0U0 273 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 SPECC1LQ69YQ0 1117 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 Q6ZSR6 202 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 KANSL1Q7Z3B3 1105 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 LRRC49Q8IUZ0 686 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 EID2Q8N6I1 236 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 OR13H1Q8NG92 308 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 OR8K1Q8NGG5 319 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 CXorf40AQ8TE69 158 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 CELF6Q96J87 481 aaKnown RBP16.69■□□□□ 0.26
TVP23B-206ENST00000574226 MYOCQ99972 504 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 NUP85Q9BW27 656 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 XPO4Q9C0E2 1151 aaKnown RBP16.69■□□□□ 0.26
TVP23B-206ENST00000574226 THAP2Q9H0W7 228 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 SUV39H2Q9H5I1 410 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 ATP13A3Q9H7F0 1226 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 GPR27Q9NS67 375 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 ZNHIT6Q9NWK9 470 aaKnown RBP16.69■□□□□ 0.26
TVP23B-206ENST00000574226 RCOR3Q9P2K3 495 aaPredicted RBP16.69■□□□□ 0.26
TVP23B-206ENST00000574226 ANAPC7Q9UJX3 599 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 FRYQ5TBA9 3013 aa16.69■□□□□ 0.26
TVP23B-206ENST00000574226 TSPAN11A1L157 253 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 J3KR12 359 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 ABCB7O75027 752 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 TM7SF2O76062 418 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 ALPPL2P10696 532 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 CKMT2P17540 419 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 SERPINA4P29622 427 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 SERPINB6P35237 376 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 HSPA9P38646 679 aaKnown RBP16.68■□□□□ 0.26
TVP23B-206ENST00000574226 YPEL5P62699 121 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 POLR2LP62875 67 aaKnown RBP16.68■□□□□ 0.26
TVP23B-206ENST00000574226 ZNF211Q13398 564 aaPredicted RBP16.68■□□□□ 0.26
TVP23B-206ENST00000574226 PTK2BQ14289 1009 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 SMAD1Q15797 465 aaKnown RBP16.68■□□□□ 0.26
TVP23B-206ENST00000574226 HADHQ16836 314 aaKnown RBP16.68■□□□□ 0.26
TVP23B-206ENST00000574226 ERAP2Q6P179 960 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 TMCO3Q6UWJ1 677 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 POLNQ7Z5Q5 900 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 PTAR1Q7Z6K3 402 aaPredicted RBP16.68■□□□□ 0.26
TVP23B-206ENST00000574226 TMPRSS12Q86WS5 348 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 ARHGAP12Q8IWW6 846 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 BBS5Q8N3I7 341 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 VOPP1Q96AW1 172 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 BMFQ96LC9 184 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 CINPQ9BW66 212 aaPredicted RBP16.68■□□□□ 0.26
TVP23B-206ENST00000574226 FZD3Q9NPG1 666 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.68■□□□□ 0.26
TVP23B-206ENST00000574226 EVA1BQ9NVM1 165 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 UVRAGQ9P2Y5 699 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 SEPT3Q9UH03 358 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 IPO11Q9UI26 975 aaKnown RBP16.68■□□□□ 0.26
TVP23B-206ENST00000574226 CA5BQ9Y2D0 317 aa16.68■□□□□ 0.26
TVP23B-206ENST00000574226 ANKRD11Q6UB99 2663 aaPredicted RBP16.67■□□□□ 0.26
TVP23B-206ENST00000574226 TDRD6O60522 2096 aaKnown RBP16.67■□□□□ 0.26
TVP23B-206ENST00000574226 SPTY2D1-AS1A0A0U1RR47 76 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 A0A1W2PQ67 120 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 GOLGA8CPA6NN73 597 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 H3BM21 787 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 DFFAO00273 331 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 RFPL3O75679 317 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 TIMP2P16035 220 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 DGKAP23743 735 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 NFKBIAP25963 317 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 HNF1BP35680 557 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 CLDN2P57739 230 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 FGL2Q14314 439 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 SLC18A3Q16572 532 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 UGP2Q16851 508 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 TMEM52BQ4KMG9 183 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 SRLQ86TD4 932 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 PARGQ86W56 976 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 OR4C6Q8NH72 309 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 NSMCE1Q8WV22 266 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 TSC1Q92574 1164 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 PSKH2Q96QS6 385 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 KLF6Q99612 283 aaPredicted RBP16.67■□□□□ 0.26
TVP23B-206ENST00000574226 DNAJC7Q99615 494 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 DUSP23Q9BVJ7 150 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 TSPY26PQ9H489 355 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 USP29Q9HBJ7 922 aa16.67■□□□□ 0.26
TVP23B-206ENST00000574226 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.66■□□□□ 0.26
TVP23B-206ENST00000574226 SSU72P8A0A1W2PR75 194 aa16.66■□□□□ 0.26
TVP23B-206ENST00000574226 CFAP69A5D8W1 941 aa16.66■□□□□ 0.26
TVP23B-206ENST00000574226 POM121BA6NF01 834 aa16.66■□□□□ 0.26
TVP23B-206ENST00000574226 PIAS2O75928 621 aa16.66■□□□□ 0.26
TVP23B-206ENST00000574226 CSF2P04141 144 aa16.66■□□□□ 0.26
TVP23B-206ENST00000574226 H2AFZP0C0S5 128 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms