RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 PRNPP04156 253 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 ALDH4A1P30038 563 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 HNRNPH3P31942 346 aaKnown RBP6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 IGFALSP35858 605 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 GPR3P46089 330 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 NEK3P51956 506 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 MYL6P60660 151 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 KCNA1Q09470 495 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 DNASE1L3Q13609 305 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 TTC38Q5R3I4 469 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 NADSYN1Q6IA69 706 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 TMEM71Q6P5X7 295 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 C6orf15Q6UXA7 325 aaPredicted RBP6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 RPTNQ6XPR3 784 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 UNC93AQ86WB7 457 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 GPBP1Q86WP2 473 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 C17orf82Q86X59 251 aaPredicted RBP6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 CEP97Q8IW35 865 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 SFTPA2Q8IWL1 248 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 UNC45BQ8IWX7 931 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 GPD1LQ8N335 351 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 FAM46DQ8NEK8 389 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 TSACCQ96A04 125 aaPredicted RBP6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 SYAP1Q96A49 352 aaPredicted RBP6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 MYEOVQ96EZ4 313 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 SMR3AQ99954 134 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 DDX50Q9BQ39 737 aaKnown RBP6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 CBWD1Q9BRT8 395 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 FAM49BQ9NUQ9 324 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 ZNF233A6NK53 670 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 RHPN2P1A8MT19 583 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 C21orf140B9A014 251 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 C19orf84I3L1E1 186 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 RNF103O00237 685 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 POLR1CO15160 346 aaPredicted RBP6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 TSPAN6O43657 245 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 DTNBO60941 627 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 HEXAP06865 529 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 ADRB3P13945 408 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 IDEP14735 1019 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 BMP6P22004 513 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 MPSTP25325 297 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 CASP14P31944 242 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 CSF2RBP32927 897 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 DDIT3P35638 169 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 KIR3DL1P43629 444 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 TCEA2Q15560 299 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 ZRSR1Q15695 479 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 IL17AQ16552 155 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 TMEM119Q4V9L6 283 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 MS4A13Q5J8X5 152 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 RAB41Q5JT25 222 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 SPECC1LQ69YQ0 1117 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 PM20D1Q6GTS8 502 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 XKRXQ6PP77 449 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 RUFY3Q7L099 469 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 ARHGAP22Q7Z5H3 698 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 SH2D3CQ8N5H7 860 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 ACBD4Q8NC06 268 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 OR2A12Q8NGT7 310 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 DNAJB8Q8NHS0 232 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 RNF139Q8WU17 664 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 INPP5DQ92835 1189 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 RNF34Q969K3 372 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 CYFIP2Q96F07 1278 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 PPP1R16AQ96I34 528 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 DUSP16Q9BY84 665 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 SDCBP2Q9H190 292 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 ZHX3Q9H4I2 956 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 SEMA3GQ9NS98 782 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 GPR83Q9NYM4 423 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 TMEM9Q9P0T7 183 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 SUCOQ9UBS9 1254 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 SLC25A13Q9UJS0 675 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 PCDHGA10Q9Y5H3 936 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 DGKBQ9Y6T7 804 aa6.7□□□□□ -1.34
HERPUD1-217ENST00000569429 ANK3Q12955 4377 aaKnown RBP6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 IGHV1OR21-1A0A087WYE8 117 aa6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 B4DGG1 531 aa6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 BNIP3LO60238 219 aa6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 TBCAO75347 108 aaKnown RBP6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 SIX3O95343 332 aaPredicted RBP6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 TNFP01375 233 aa6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 ZNF28P17035 718 aa6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 AGAP20933 346 aa6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 HTR1BP28222 390 aa6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 PRPHP41219 470 aa6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 GARSP41250 739 aaKnown RBP6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 GLRBP48167 497 aa6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 NDST2P52849 883 aa6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 SRP54P61011 504 aaKnown RBP6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 TRPC3Q13507 836 aa6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 ZNF667Q5HYK9 610 aa6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 L1TD1Q5T7N2 865 aaKnown RBP6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 MTFR2Q6P444 385 aa6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 ENPP7Q6UWV6 458 aa6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 IGFL3Q6UXB1 125 aa6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 CLEC9AQ6UXN8 241 aa6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 BHLHA9Q7RTU4 235 aa6.69□□□□□ -1.34
HERPUD1-217ENST00000569429 TAF8Q7Z7C8 310 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms