RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 DKK3Q9UBP4 350 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 SERGEFQ9UGK8 458 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 CYP8B1Q9UNU6 501 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 PCDHGC4Q9Y5F7 938 aa16.92■□□□□ 0.3
COMMD4-224ENST00000568877 C16orf96A6NNT2 1141 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 PDE2AO00408 941 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-224ENST00000568877 PLK4O00444 970 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 TRAFD1O14545 582 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-224ENST00000568877 SOCS5O75159 536 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 MMP2P08253 660 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 OXTRP30559 389 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 CD86P42081 329 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 SKOR1P84550 965 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 CCDC15Q0P6D6 951 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 CFAP58Q5T655 872 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 ITPRIPL1Q6GPH6 555 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 TTC27Q6P3X3 843 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-224ENST00000568877 ERN2Q76MJ5 926 aaKnown RBP16.91■□□□□ 0.3
COMMD4-224ENST00000568877 PARS2Q7L3T8 475 aaKnown RBP16.91■□□□□ 0.3
COMMD4-224ENST00000568877 PRPF39Q86UA1 669 aaKnown RBP16.91■□□□□ 0.3
COMMD4-224ENST00000568877 ZBTB44Q8NCP5 570 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 ATL2Q8NHH9 583 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 ECHDC3Q96DC8 303 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 FCRL5Q96RD9 977 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 RBM15Q96T37 977 aaKnown RBP eCLIP16.91■□□□□ 0.3
COMMD4-224ENST00000568877 GBA3Q9H227 469 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 NEUROG2Q9H2A3 272 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 RSPH14Q9UHP6 348 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 FZD4Q9ULV1 537 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 INVSQ9Y283 1065 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 RAI2Q9Y5P3 530 aa16.91■□□□□ 0.3
COMMD4-224ENST00000568877 CACNA1IQ9P0X4 2223 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 IGHV1OR15-9A0A0B4J2B8 117 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 H0Y858 1186 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 HTRA2O43464 458 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-224ENST00000568877 PHF2O75151 1096 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 URI1O94763 535 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-224ENST00000568877 IFNB1P01574 187 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 COILP38432 576 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-224ENST00000568877 NEK3P51956 506 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 LMNB2Q03252 620 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 TRAF2Q12933 501 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 P3H1Q32P28 736 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 FBXL19Q6PCT2 694 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 BRAT1Q6PJG6 821 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 ARHGEF18Q6ZSZ5 1173 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 GSTA5Q7RTV2 222 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 FAM124AQ86V42 546 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 FAM160A2Q8N612 972 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-224ENST00000568877 FRMD1Q8N878 549 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 PRSS33Q8NF86 280 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 SPATA22Q8NHS9 363 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 KIF18AQ8NI77 898 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 FAM131CQ96AQ9 280 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 TADA1Q96BN2 335 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 SPACA7Q96KW9 195 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 PCDHGA2Q9Y5H1 932 aa16.9■□□□□ 0.3
COMMD4-224ENST00000568877 A0A1W2PQ67 120 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 TSPAN11A1L157 253 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 SLC7A4O43246 635 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 MT-CYBP00156 380 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-224ENST00000568877 ADRB3P13945 408 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 TIMP2P16035 220 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 CA4P22748 312 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 CD6P30203 668 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 CNR2P34972 360 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 TCF15Q12870 199 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 SLC14A2Q15849 920 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 PARP6Q2NL67 630 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 PIP5KL1Q5T9C9 394 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 ARMC12Q5T9G4 340 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 AGBL4Q5VU57 503 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 CCDC137Q6PK04 289 aaKnown RBP16.89■□□□□ 0.29
COMMD4-224ENST00000568877 TTC7BQ86TV6 843 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 ZSWIM9Q86XI8 627 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 PAF1Q8N7H5 531 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 CCDC89Q8N998 374 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 PDCD6IPQ8WUM4 868 aaKnown RBP16.89■□□□□ 0.29
COMMD4-224ENST00000568877 GAB3Q8WWW8 586 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 TOE1Q96GM8 510 aaKnown RBP16.89■□□□□ 0.29
COMMD4-224ENST00000568877 TDRD1Q9BXT4 1180 aaKnown RBP16.89■□□□□ 0.29
COMMD4-224ENST00000568877 BTBD1Q9H0C5 482 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 KCNH6Q9H252 994 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 SGK2Q9HBY8 427 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 WSB2Q9NYS7 404 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-224ENST00000568877 UBP1Q9NZI7 540 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 FAM153AQ9UHL3 310 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 MBD1Q9UIS9 605 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-224ENST00000568877 CDC23Q9UJX2 597 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 PCDHB9Q9Y5E1 797 aa16.89■□□□□ 0.29
COMMD4-224ENST00000568877 F5H423 210 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-224ENST00000568877 CCDC188H7C350 402 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 HRO43593 1189 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 FZD6O60353 706 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 RPP40O75818 363 aaKnown RBP16.88■□□□□ 0.29
COMMD4-224ENST00000568877 PGLSO95336 258 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 ETS1P14921 441 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 PSMB4P28070 264 aa16.88■□□□□ 0.29
COMMD4-224ENST00000568877 ACSL1P33121 698 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms